Query= MSMg01no319_a01.b1 MSMg01no319_a01.b1 CHROMAT_FILE:
MSMg01no319_a01.b1 PHD_FILE: MSMg01no319_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:16 2005
(648 letters)
>mm_chr10_89793909_89794956
Length = 1048
Score = 1230 bits (636), Expect = 0.0
Identities = 645/648 (99%)
Strand = Plus / Plus
Query: 1 atactatacatcatccagcgacttcctccctgactttcatgggctttgacagcccacgtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 atactatacatcatccagcgacttcctccctgactttcatgggctttgacagtccacgtg 260
Query: 61 aggctgacccctgtacgatccactttcaccatgagagtgctgagtctccaccctttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggctgacccctgtacgatccactttcaccatgagagtgctgagtctccaccctttttta 320
Query: 121 tgtttgatgtggttggttaggagatgcaataagggtaatctatgttagctttctactggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttgatgtggttggttaggagatgcaataagggtaatctatgttagctttctactggg 380
Query: 181 cagagaatgatcgtagtgcatggccattaacttctgtattaccttcaggagagcatctat 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagaatgatcatagtgcatggccattaacttctgtattaccttcaggagagcatctat 440
Query: 241 gctcctcactcagtggtatatggaagtctgtttgtgttctggcacaagattcttctttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcctcactcagtggtatatggaagtctgtttgtgttctggcacaagattcttctttat 500
Query: 301 aactagcatcccagtgaacttaactcagtgcaactcactgagccaggaaacacacattcc 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 aactagcatcccagtgaacttaactcagtgcaactcactgagccaggaaatacacattcc 560
Query: 361 cacacttcccaatacaacatatcttgtacttctccattatcaccctgtttctccttcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacacttcccaatacaacatatcttgtacttctccattatcaccctgtttctccttcagg 620
Query: 421 gtaagacctaagcattgacaaaaataatcattttcccatgctgtctccattgagatgccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaagacctaagcattgacaaaaataatcattttcccatgctgtctccattgagatgccc 680
Query: 481 ttctccactcatattactatttctgtgtatgttctaggagcttatattccaaaagaggta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctccactcatattactatttctgtgtatgttctaggagcttatattccaaaagaggta 740
Query: 541 gatgatcaatgacccagtaaataataaagactactataaccacagattgtgataaatcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatgatcaatgacccagtaaataataaagactactataaccacagattgtgataaatcat 800
Query: 601 atgaatgaactaaacagaaaatggtttgtggggaattgggaaagacag 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atgaatgaactaaacagaaaatggtttgtggggaattgggaaagacag 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_a01.g1 MSMg01no319_a01.g1 CHROMAT_FILE:
MSMg01no319_a01.g1 PHD_FILE: MSMg01no319_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:17 2005
(578 letters)
>mm_chr10_89961968_89962944
Length = 977
Score = 1027 bits (531), Expect = 0.0
Identities = 567/579 (97%), Gaps = 3/579 (0%)
Strand = Plus / Minus
Query: 1 tgtccctgggacccacatagtggaaagagaaaactgactcttgtttctaccggcttggcc 60
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 821 tgtccctgggacccacatagtggaaagagaaaactgactcttggttctacaggcttggcc 762
Query: 61 tcacctaccttgccccacacccacatgaatacataaaagtaaatttaaatcttt-aaaaa 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 761 tcacctaccttgccccacacccacatgaatacataaaagtaaatttaaatctttaaaaaa 702
Query: 120 accctgcccgtcccccccctccccccttaaactcatctctcatgagtgtgtggacagttg 179
||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 701 accctgcccat-ccccccct-cccccttaaactcatctctcatgagtgtgtggacagttg 644
Query: 180 tttgagagggtgcatgatctgccttcccagaatggaagtactccatgtttcttcacatct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tttgagagggtgcatgatctgccttcccagaatggaagtactccatgtttcttcacatct 584
Query: 240 cagctgaaggaactggtatagtcccattcctacttaaatgaagtcacaggtttacatgta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cagctgaaggaactggtatagtcccattcctacttaaatgaagtcacaggtttacatgta 524
Query: 300 aaatggagcgggaacagccttcccagcaccgctccacagtgtacagtgccaaagacagac 359
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 523 aaatggagtgggaacagccttcccagcaccgctccacagtgtacagtgggaaagacagac 464
Query: 360 ggaagacccagggaaagacatcctgtctcaactccagaacagctctacattttctattta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ggaagacccagggaaagacatcctgtctcaactccagaacagctctacattttctattta 404
Query: 420 aaaataatgtttgctcgaggatttgatgggtagcactgatgaagtccaatattttgatgt 479
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aaaataatgtttgctcaaggatttgatgggtagcactgatgaagtccaatattttgatgt 344
Query: 480 ttaatgttcttcttccaaggttgctatgaactttgtttatgattagatggcaaggttata 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 343 ttaatgttcttcttccaaggttgctatgaactttgtttatgattagatggtaaggttata 284
Query: 540 tcaaatatccatacttattgattatgtaatttttatcct 578
||||||||| |||||||||||||||||||||||||||||
Sbjct: 283 tcaaatatctatacttattgattatgtaatttttatcct 245
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 977
Length adjustment: 10
Effective length of query: 568
Effective length of database: 967
Effective search space: 549256
Effective search space used: 549256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
