Query= MSMg01no319_e03.b1 MSMg01no319_e03.b1 CHROMAT_FILE:
MSMg01no319_e03.b1 PHD_FILE: MSMg01no319_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:34 2005
(294 letters)
>mm_chr10_52473630_52474323
Length = 694
Score = 495 bits (256), Expect = e-144
Identities = 281/294 (95%), Gaps = 9/294 (3%)
Strand = Plus / Minus
Query: 1 agaatgataaggcagaaagaaaagggaggtaagggtggaagaaaaataatgaggaaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 599 agaatgataaggcagaaagaaaagggaggtaagggtggaagaaaaataatgaggagaagg 540
Query: 61 aataataataataaggaggaatgaggagaagaggagcagaaggagcagaaggagcaactg 120
|||||||||||| ||||||||||||||||||| | |||||| |||||||||||
Sbjct: 539 aataataataatgaggaggaatgaggagaaga----c-----gagcaggaggagcaactg 489
Query: 121 gcactgagaatacatgaatctcaaatactaagcctcaagtattgttatcaagttcccagg 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gcactgagaattcatgaatctcaaatactaagcctcaagtattgttatcaagttcccagg 429
Query: 181 gttcatatactccggctactttaccgtagccctaggaaatcaacacagctacccaccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gttcatatactccggctactttaccgtagccctaggaaatcaacacagctacccaccatc 369
Query: 241 tatcacaacggtgggaggaaatatcaggatgcccattccttatgtgacatatgg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tatcacaacggtgggaggaaatatcaggatgcccattccttatgtgacatatgg 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_e03.g1 MSMg01no319_e03.g1 CHROMAT_FILE:
MSMg01no319_e03.g1 PHD_FILE: MSMg01no319_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:34 2005
(289 letters)
>mm_chr10_52418500_52419188
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Plus
Query: 1 aatggagttttccagttgggtgtggtggcacacagctgtacttctatcactgaggagatg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatggagttttccagctgggtgtggtggcacacagctgtacttctatcactgaggagatg 260
Query: 61 gaggcaggagaatcctgaatctgaggctagtctgggctgcacagtgagttctaagttatg 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gaggcaggagaatcctgaatctgaggctagtctgggcttcacagtgagttctaagttatg 320
Query: 121 tagttcttggttatgtagctagaccttgtctagaactagcaaataaacaaaacaacaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagttcttggttatgtagctagaccttgtctagaactagcaaataaacaaaacaacaaca 380
Query: 181 aataaacaaaacccctaaacccaaacaacagctagaattttctgaaaatattgatgggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataaacaaaacccctaaacccaaacaacagctagaattttctgaaaatattgatgggtg 440
Query: 241 gacagtgcataggcaactctgcgtttgcatggtttgtgtgttgcagaca 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacagtgcataggcaactctgcgtttgcatggtttgtgtgttgcagaca 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
