Query= MSMg01no320_p15.b1 MSMg01no320_p15.b1 CHROMAT_FILE:
MSMg01no320_p15.b1 PHD_FILE: MSMg01no320_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:37 2005
(603 letters)
>mm_chr10_115418893_115419895
Length = 1003
Score = 1075 bits (556), Expect = 0.0
Identities = 589/600 (98%), Gaps = 2/600 (0%)
Strand = Plus / Minus
Query: 1 aattattactcctttttatttcatgtgtgtatcctctgcaatcatgttaatcccaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 799 aattattactcctttttatttcatgtgtgtatcctctgcaatcatgttaatgctaataaa 740
Query: 61 aaacaaaaacaaaacaaaacgtcagggaccctggctagagaaattatcctgagaaatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aaacaaaaacaaaacaaaacgtcagggaccctggctagagaaattatcctgagaaatgac 680
Query: 121 gatgtggctttaaggcttattttcagatttatacttcccgctcttctgcaagtctgaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gatgtggctttaaggcttattttcagatttatacttcccgctcttctgcaagtctgaaga 620
Query: 181 taaaagtgctcataggcttagaatgagatatttccattcatttcggtgttatagctatgc 240
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 619 taaaagtgctcataggtttagaatgagatatttccattcatttcagtgttatagccatgc 560
Query: 241 atttatagctctgatcattagcctgaatcttctccacttaagaacgtctgtttttatttt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atttatagctctgagcattagcctgaatcttctccacttaagaacgtctgtttttatttt 500
Query: 301 ttttcctctgctctagtctcacatccataaataaacacatacatctattgctatagagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttttcctctgctctagtctcacatccataaataaacacatacatctattgctatagagca 440
Query: 361 cggacatattcgcgtttttcatttaatagttgtcacattgctccctagtctccacatgta 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cggacatattcgcgtttctcatttaatagttgtcacattgctccctagtctccacatgta 380
Query: 421 tgctttgaatggcttccaactgatcctctgtcaaacactgtgatcttatttttctgtttc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgctttgaatggcttccaactgatcctctgtcaaacactgtgatcttatttttctgttt- 321
Query: 481 cccgatatgaacattatagaccctcgcatgtttttgtaagtgtgggccaaactcactgcc 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 320 cccgatatgaacattatagaccctcccatgtttttgtaagtgtgggccaaactcactgcc 261
Query: 541 ataaagcctttttgcaaatagaatc-tttttctccgttgagctatttgctgagcagaaaa 599
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 260 ataaaacctttttgcaaatagaatcttttttctccgttgagctatttgctgagcagaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_p15.g1 MSMg01no320_p15.g1 CHROMAT_FILE:
MSMg01no320_p15.g1 PHD_FILE: MSMg01no320_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:37 2005
(235 letters)
>mm_chr10_115240674_115241308
Length = 635
Score = 402 bits (208), Expect = e-117
Identities = 228/236 (96%), Gaps = 4/236 (1%)
Strand = Plus / Plus
Query: 1 gcatcctacgtcccttgagtaatactgaatgcaaagcatttgcaatgaagtctttaaagc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatcctacatcccttgagtaatactgaatgcaaagcatttgcaatgaagtctttaaagc 260
Query: 61 tgagggcaaaagccccaaagaaggctacttcctcatctggacccttcaggtaggcgatag 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagggtaaaagccccaaagaaggctacttcctcatctggacccttcaggtaggcgatag 320
Query: 121 cttcgtctactgagaaggcctag---aagttcctcttcttccatgtgggttttctccctc 177
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcgtctactgagaaggcctaggagaagttcctcttcttccatgtgggttttctccctc 380
Query: 178 agcacacttcaaaagagaccatggtgaggaacaaatccttaacttcttgttttttg 233
|||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 381 agcacacttcaaaagagaccattgtgaggaacaa-tccttaacttcttgctttttg 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
