Query= MSMg01no321_h23.b1 MSMg01no321_h23.b1 CHROMAT_FILE:
MSMg01no321_h23.b1 PHD_FILE: MSMg01no321_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:15 2005
(673 letters)
>mm_chr10_27455690_27456762
Length = 1073
Score = 1232 bits (637), Expect = 0.0
Identities = 664/673 (98%)
Strand = Plus / Plus
Query: 1 gaattcctttcctgtattccatccttgaagctttgaccgtaggtgtaaagatgtctgtgt 60
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcctttcctggaatctatccttgaagctttgaccgtaggtgtaaagatgtctgtgt 260
Query: 61 gtacaccctgcctcagcttactggacagttcatctctctccccatgtcccacctcagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtacaccctgcctcagcttactggacagttcatctctctccccatgtcccacctcagttt 320
Query: 121 ctgcctcccaaccttgaaaaatgccctagactagcagctttgtgtagtttcccattctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 ctgcctcccaaccttgaaaaatgccctagactagcagctttgtgtagtttctcattctcc 380
Query: 181 agccaagttctaccttcttaaggctaccccccactcaacgactctagaaaaaaaccttct 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 agccaagttctaccttcttaaggctaccccccactcaatgactctagaaaaaaaccttct 440
Query: 241 gaactcaccccattgtccctgagtttcactctttgatctcctaagagtacagatgccact 300
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 441 gaactcaccccattgtccctgagtttcactctttgatctcataagagtgcagatgccact 500
Query: 301 gactgagcagagttctgtgtgacttgagcatctgctaacaccaaccgagactaaggagaa 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 gactgagcagagttctgtgtgacttgagcatctgctaacaccaaccaagactaaggagaa 560
Query: 361 ggtgctgatgaattcaaagatacaggtgttttctcttgtcacaatgttcatggtcctcaa 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtgctgatgatttcaaagatacaggtgttttctcttgtcacaatgttcatggtcctcaa 620
Query: 421 cacttcttaataaattttgatgtgtccttgtaacagccaggcctgacttgagtctctttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacttcttaataaattttgatgtgtccttgtaacagccaggcctgacttgagtctctttc 680
Query: 481 ctgaactgcaggacctgtctgaactctattcttagtgatcctctgtgggtaacattaggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgaactgcaggacctgtctgaactctattcttagtgatcctctgtgggtaacattaggc 740
Query: 541 ccactatctttagcaaatgccttgtctgtttcttccttccccatagcttggtttttactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccactatctttagcaaatgccttgtctgtttcttccttccccatagcttggtttttactt 800
Query: 601 ttaaattttagttatataattttgttaggatcaggtttcaagtatctcaggctggcctca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttaaattttagttatataattttgttaggatcaggtttcaagtatctcaggctggcctca 860
Query: 661 aaaatctaaggat 673
|||||||||||||
Sbjct: 861 aaaatctaaggat 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_h23.g1 MSMg01no321_h23.g1 CHROMAT_FILE:
MSMg01no321_h23.g1 PHD_FILE: MSMg01no321_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:15 2005
(360 letters)
>mm_chr10_27595721_27596480
Length = 760
Score = 594 bits (307), Expect = e-174
Identities = 322/327 (98%), Gaps = 1/327 (0%)
Strand = Plus / Minus
Query: 7 aattctttaacatatccattcaacaaaacccatacaatgaattggattctcaactaaaca 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aattctttaacatatccattcaacaaaacccatacaatgaattggattctcaactaaaca 267
Query: 67 taatctgacatccatgtggtaaagggctaaacaaaaatggcaagttgtcactggtagacg 126
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 266 taatctgacatccatgtggtaatgggctaaacaaaaatggcaagttgtcactggtagacg 207
Query: 127 tgttatagtttgagtaaggactgcactttataggcttatgtttgaacacttggtccctgg 186
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 206 tgttatagtttgagtaaggactgcactctataggcttatgtttgaacacttggtccctgg 147
Query: 187 gggacgagctgtttggaaaggttatggaacctttgggaagtgtgattttactataaaaag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gggacgagctgtttggaaaggttatggaacctttgggaagtgtgattttactataaaaag 87
Query: 247 tttagcactggggcactggcttagcctctcttcagtctctgtgttacctgtacttttttt 306
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 86 tttagcactggggcactggcttagcctctcttcagtctctgtgttacctgtactgttttt 27
Query: 307 tttttaaagatttatttatttacttta 333
||| ||||||||||||||||||||||
Sbjct: 26 ttta-aaagatttatttatttacttta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
