Query= MSMg01no322_i14.b1 MSMg01no322_i14.b1 CHROMAT_FILE:
MSMg01no322_i14.b1 PHD_FILE: MSMg01no322_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:31 2005
(296 letters)
>mm_chr10_21406833_21407526
Length = 694
Score = 524 bits (271), Expect = e-153
Identities = 289/295 (97%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 1 gggcagtttaaccacaggtagatttagcaaagcaaagaggggatggagtgggctgttcca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gggcagtttaaccacaggtagatttagcaaagcaaaga-gggatggagtgggctgttcca 259
Query: 61 aaggggcttagaaggctggtggattctgtattgctgatttaagaggaacttatgaatatt 120
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 260 aaggggcttagaaggctggtggattctgta-tgctgatttaagaggaacgtatgaatatt 318
Query: 121 tatggatggatggcatatttatgaaggcgaggccaactttctcctgtccaagttagggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tatggatggatggcatatttatgaaggcgaggccaactttctcctgtccaagttagggta 378
Query: 181 gactagatctcttatctagggcatttcttttgtaattctctttagatatctatgggaggt 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gactagatctcttatctagggtatttcttttgtaattctctttagatatctatgggaggt 438
Query: 241 ggtgggtgtgggccgttatttcaaaggcatgtagaggtgattgcataatacagtc 295
||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggtgggtgtgggccggtgtttcaaaggcatgtagaggtgattgcataatacagtc 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 694
Length adjustment: 9
Effective length of query: 287
Effective length of database: 685
Effective search space: 196595
Effective search space used: 196595
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_i14.g1 MSMg01no322_i14.g1 CHROMAT_FILE:
MSMg01no322_i14.g1 PHD_FILE: MSMg01no322_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:31 2005
(290 letters)
>mm_chr10_21578379_21579068
Length = 690
Score = 545 bits (282), Expect = e-160
Identities = 288/290 (99%)
Strand = Plus / Minus
Query: 1 tgttttcaccagcacccttttttcctagaagccctctctgtgtgtttctgtgtgtcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgttttcaccagcacccttttttcctagaagccctctctgtgtgtttctgtgtgtcctgg 431
Query: 61 acagattcaaaccgtaggccagcataaaccttcccatcccagaccctctttatctctatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 acagattcaaaccgtaggccagcataaaccttcccatcccagaccctctttatctctatt 371
Query: 121 tcctcatcagtcagaggagggcagcttcttcttttaaagcccttggtagggctaatggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcctcatcagtcagaggagggcagcttcttcttttaaagcccttggtagggctaatggag 311
Query: 181 ttggtctatgtgaaaaccattaaaagctgtcatcattgtcatggtttgctttgtttactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttggtctatgtgaaaaccattaaaagctgtcatcattgtcatggtttgctttgtttactt 251
Query: 241 tgagattttatctgctagccaaggatgaccttgaccttttggcccttttc 290
|||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgagatttcatctactagccaaggatgaccttgaccttttggcccttttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
