Query= MSMg01no322_o07.b1 MSMg01no322_o07.b1 CHROMAT_FILE:
MSMg01no322_o07.b1 PHD_FILE: MSMg01no322_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:57 2005
(678 letters)
>mm_chr10_34672968_34674045
Length = 1078
Score = 611 bits (316), Expect = e-179
Identities = 325/330 (98%), Gaps = 4/330 (1%)
Strand = Plus / Minus
Query: 349 ccttggactccattttcctccccacaactctgactgctttttgtgtgacccaaaagcacc 408
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ccttggactccattttcctcctcacaactctgactgctttttgtgtgacccaaaagcacc 714
Query: 409 agggacaccaagccactctgttactagagacaatagaagcacaaagttagtaccataaac 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 agggacaccaagccactctgttactagagacaatagaagcacaaagttagtaccataaac 654
Query: 469 cccagaggtcatacaggccataaaaaccccaggggagacaccctactgaacctgaagact 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cccagaggtcatacaggccataaaaaccccaggggagacaccctactgaacctgaagact 594
Query: 529 taccactcaccaaaaccccaggccacccaggttagaagacagaggaaacaaaaatcaagg 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 taccactcaccaaaaccccaggccacccaggttagaagacagaggaaacaaaaatcaagg 534
Query: 589 gagaaaacaaaacaaagcaaacaaaaaacaaacgaacaaaaataccacccatctaacaaa 648
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 533 gagaaaacaaaacaaagcaaacaaaaaacaaac----aaaaataccacccatctaacaaa 478
Query: 649 gataagttcagaaatcaacatccaaatatg 678
||||||||||||||||||||||||||||||
Sbjct: 477 gataagttcagaaatcaacatccaaatatg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_o07.g1 MSMg01no322_o07.g1 CHROMAT_FILE:
MSMg01no322_o07.g1 PHD_FILE: MSMg01no322_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:57 2005
(653 letters)
>mm_chr10_34591287_34592341
Length = 1055
Score = 1224 bits (633), Expect = 0.0
Identities = 647/653 (99%), Gaps = 4/653 (0%)
Strand = Plus / Plus
Query: 4 cctctaaatggcggtttactgcaaggttaattacctatgagttagaaaatgcagccttta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cctctaaatggcggtttactgcaaggttaattacctatgagttagaaaatgcagccttta 263
Query: 64 tgttgatactaaaagcagagtt---tgcctacattgggtatctctgcagaaactaatttt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 tgttgatactaaaagcagagttagctgcctacattgggtatctctgcagaaactaatttt 323
Query: 121 caccaaaaatgtgaattttagagcaagtttgagtactgtgtaatttattgctgttgatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caccaaaaatgtgaattttagagcaagtttgagtactgtgtaatttattgctgttgatag 383
Query: 181 actggtctacaatggcaccccctaaatcatatttaatgggatacaatctatgttttcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actggtctacaatggcaccccctaaatcatatttaatgggatacaatctatgttttcaac 443
Query: 241 acgtgtatttttttttattcatagagaggatgtatcatgataaatattatctcagagtag 300
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acgtggatttttttt-attcatagagaggatgtatcatgataaatattatctcagagtag 502
Query: 301 tggtttggttgttaggacgacacgcatgtgacagtactaacgtttcaattatccacttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tggtttggttgttaggacgacacgcatgtgacagtactaacgtttcaattatccacttgc 562
Query: 361 atcaatcaatcttttcgttttcgacactgttgcctgcagtaatgtcacagcttttctgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atcaatcaatcttttcgttttcgacactgttgcctgcagtaatgtcacagcttttctgtc 622
Query: 421 agacaggagaactttgcgggaaatgttattcattacagctgcaaatctgtcactgtgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agacaggagaactttgcgggaaatgttattcattacagctgcaaatctgtcactgtgcct 682
Query: 481 ggcatggcttgttaatgacaacatttatttcaaagagccatgtttcgctttgtttcagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ggcatggcttgttaatgacaacatttatttcaaagagccatgtttcgctttgtttcagga 742
Query: 541 gagttgactctgtgatcgtaaagtctaatgaaatgccaaaaagatgaagtgagcaagttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gagttgactctgtgatcgtaaagtctaatgaaatgccaaaaagatgaagtgagcaagttt 802
Query: 601 tccaaaaatacacgaaagtgatccacatccgtttcgaaaaaggaacaagagat 653
||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 803 tccaaaaatacacgaaagtgatccaaatccgtttcgaaaaaggaacaagagat 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1055
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1045
Effective search space: 671935
Effective search space used: 671935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
