Query= MSMg01no323_k14.b1 MSMg01no323_k14.b1 CHROMAT_FILE:
MSMg01no323_k14.b1 PHD_FILE: MSMg01no323_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:28 2005
(264 letters)
>mm_chr10_9474780_9475443
Length = 664
Score = 480 bits (248), Expect = e-140
Identities = 262/270 (97%), Gaps = 6/270 (2%)
Strand = Plus / Plus
Query: 1 aaataggttagaaaattctaactatggagatatccattatcttcactactcaaggatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaataggttagaaaattctaactatggagatatccattatcttcactactcaaggatgtt 254
Query: 61 ccatacaccaatacactggtttttttttt------agtggaccttttcagagatgtcaac 114
|||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 255 ccatacaccaatacactgtttttttttttttttttagtggaccttttcagagatgtcaac 314
Query: 115 tcagaccctgctcacacacatggactcagaaccagtatcttaataagactccctggttat 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcagaccctgctcacacacatggactcagaaccagtatcttaataagactccctggttat 374
Query: 175 gtgtgtgcatttagatatagttcttggctccattccaacccatatatgtatatatgtata 234
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtgtgtgcatttagatctagttcttggctccattccaacccatatatgtatatatgtata 434
Query: 235 tctgtgtgtgtatgtatgtgtgtgtatata 264
||||||||||||||||||||||||||||||
Sbjct: 435 tctgtgtgtgtatgtatgtgtgtgtatata 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no323_k14.g1 MSMg01no323_k14.g1 CHROMAT_FILE:
MSMg01no323_k14.g1 PHD_FILE: MSMg01no323_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:28 2005
(628 letters)
>mm_chr10_9646098_9647125
Length = 1028
Score = 644 bits (333), Expect = 0.0
Identities = 345/349 (98%)
Strand = Plus / Minus
Query: 1 catataatgcaggcattaatctatgcacatggttcatgcaatacataaatacaggcacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 catataatgcaggcattaatctatgcacatggttcatgcaatacataaatacaggcacta 290
Query: 61 agtgtgcagatggtgcaatacacacgtgcagacagaacatgcagacataaaataaagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agtgtgcagatggtgcaatacacacgtgcagacagaacatgcagacataaaataaagtga 230
Query: 121 acaaatataacaaacaaaagatagcagtgatgttgcgggtcagagaccaactctacttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acaaatataacaaacaaaagatagcagtgatgttgcgggtcagagaccaactctacttta 170
Query: 181 tcctgagctaatcataatcatctgaatagccattctttgcccacctctgtgtcagaaata 240
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tcctgagctaatcatactcacctgaatagccattctttgcccacctctgtgtcagaaata 110
Query: 241 acattctgtgatgagtagatttaaagccttttggaatttatcagataattagttttcatc 300
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 109 acattctgtgatgagtagatttaaagccttttggaacttagcagataattagttttcatc 50
Query: 301 cgcccaaaaggtaagaatgtcatcagaaagcacctgagacctagaggag 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 cgcccaaaaggtaagaatgtcatcagaaagcacctgagacctagaggag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
