Query= MSMg01no324_a13.b1 MSMg01no324_a13.b1 CHROMAT_FILE:
MSMg01no324_a13.b1 PHD_FILE: MSMg01no324_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:14 2005
(450 letters)
>mm_chr10_129380297_129381146
Length = 850
Score = 833 bits (431), Expect = 0.0
Identities = 443/447 (99%), Gaps = 1/447 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccaagatatcatggaactgtttttgtttcagtttgtttttttaatcataagtt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccaagatataatggaactgtttttgtttcagtttgtttttttaatcataagtt 263
Query: 64 gattcttagtgagcaggtgttcttttttcatggcacactggaaagacagaggattttatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gattcttagtgagcaggtgttcttttttcatggcacactggaaagacagaggattttatt 323
Query: 124 aaatggagtttgctcttcatattttcacttaaactgaagaaatgattcatccctgtgggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaatggagtttgctcttcatattttcacttaaactgaagaaatgattcatccctgtgggt 383
Query: 184 tggttgctcagggaatgaaattggcaaactattaaaacaaagggagaaatgtttattatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggttgctcagggaatgaaattggcaaactattaaaacaaagggagaaatgtttattatt 443
Query: 244 ataagaacacagtggtccaaccaagccatagccttgctggacatcagtgggaggagtagc 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 ataagaacacagtggtccaaccaagtcatagccttgctggacatcagtgggaggagtagc 503
Query: 304 ccctggccctgtgggggttcgatgccacagtgtaggggaatgccagagcaggaagggagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccctggccctgtgggggttcgatgccacagtgtaggggaatgccagagcaggaagggagg 563
Query: 364 agtgggtagatgggtgggagagcaccctcatagtggcagggggagggagggcatgaggga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtgggtagatgggtgggagagcaccctcatagtggcagggggagggagggcatgaggga 623
Query: 424 tgggatagggggtttcgga-ggggggg 449
||||||||||||||| ||| |||||||
Sbjct: 624 tgggatagggggttttggaaggggggg 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_a13.g1 MSMg01no324_a13.g1 CHROMAT_FILE:
MSMg01no324_a13.g1 PHD_FILE: MSMg01no324_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:14 2005
(635 letters)
>mm_chr10_129530423_129531457
Length = 1035
Score = 1019 bits (527), Expect = 0.0
Identities = 539/543 (99%)
Strand = Plus / Minus
Query: 93 gaacctgtagtaaagtggaactctccaactgggcagaaagcacactttgtaaatgatgga 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 gaacctgtagtaaagtggaactctccaactgggcagaaagcacactttgtaaatgatgga 976
Query: 153 atttaattgagtgtttagcagagaaaaatttccagtaaatgatgatcttgctacttaaac 212
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 975 atttaattgagtgtttagcagaggaaaatttccagtaaatgatgatcttgctacttaaac 916
Query: 213 aaaatgtgaaagagagggaaaatgataagttgagctgataattgttaaacaaaaagaaat 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 aaaatgtgaaagagagggaaaatgataagttgagctgataattgttaaacaaaaagaaat 856
Query: 273 cagaacttgatgactttggagtctctttatcatattaacaaaccagaagccatataattt 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 cagaacttgatgactttggagtctctttatcatattaacaaaccagaagccatataattt 796
Query: 333 acctgtaaaatggggtaggggatggaatgattaaatgtgtagcttaattttcaactgttt 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 acctgtaaaatggggtaggggatggaatgattaaatgtgtagcttaattttcaactgttt 736
Query: 393 tcaactccagtttgggacaaaagagtcttcttgtgtctctatgtgatggattggatagaa 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tcaactccagtttgggacaaaagagtcttcttgtgtctctatgtgatggattggatagaa 676
Query: 453 aaatctacccaacagttgaatgctttattgtttatattgttttgctttgtagtgggtgga 512
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 675 aaatctacccaacagttgaatgctctattgtttatattgttttgctttgtagtgggtgga 616
Query: 513 gtcacaaactggattagtggagaacagaaatgcatttcatgaaaccttattgttaacttt 572
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 615 gtcacaaactggattagtggagaacagaaatacatttcatgaaaccttattgttaacttt 556
Query: 573 aagacggtatatatgttaatagaatgtgctttgatataccatatcttgatcatttttaag 632
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aagacagtatatatgttaatagaatgtgctttgatataccatatcttgatcatttttaag 496
Query: 633 aaa 635
|||
Sbjct: 495 aaa 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
