Query= MSMg01no325_e10.b1 MSMg01no325_e10.b1 CHROMAT_FILE:
MSMg01no325_e10.b1 PHD_FILE: MSMg01no325_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:46 2005
(277 letters)
>mm_chr10_80524326_80525002
Length = 677
Score = 501 bits (259), Expect = e-146
Identities = 271/275 (98%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 3 ggaattccaggtggttccctggtggcacaggcctgtaatcccagcgctcagtaggcagag 62
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaggtggg-ccatggtggcacaggcctgtaatcccagcgctcagtaggcagag 262
Query: 63 gcaggaggatctctgtgagttccaggacagccagggccacacagagaaaccctgtcttgg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcaggaggatctctgtgagttccaggacagccagggccacacagagaaaccctgtcttgg 322
Query: 123 aagcagaaaagaaaagcaagaactctgtccatccccctgcatcagtgtccaagtgctgat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aagcagaaaagaaaagcaagaactctgtccatccccctgcatcagtgtccaagtgctgat 382
Query: 183 atgatatgctgtgatcctgccaatcccctgcacacaccccacctttgacatggcgtagtt 242
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 383 atgatatgctgtgatcctgccaatcctctgcacacaccccacctttgacatggcgtagtt 442
Query: 243 ataattaccaaacttagtgtcctgggttggttagg 277
|||||||||||||||||||||||||||||||||||
Sbjct: 443 ataattaccaaacttagtgtcctgggttggttagg 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no325_e10.g1 MSMg01no325_e10.g1 CHROMAT_FILE:
MSMg01no325_e10.g1 PHD_FILE: MSMg01no325_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:46 2005
(133 letters)
>mm_chr10_80692079_80692613
Length = 535
Score = 224 bits (116), Expect = 1e-63
Identities = 130/136 (95%), Gaps = 4/136 (2%)
Strand = Plus / Minus
Query: 1 tgttgtaaatatggaaataagaagaaaaacatgatgtatcagacatgaccctgttggtgc 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 335 tgttgtaaatatggaaataagaagaaaaacatgatgtagcagacatgaccctgttggtgg 276
Query: 61 cagggtttggtttgggggcgtccctagttgtgtg---gaggggggggttgccctcccaac 117
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 275 cagggtttggtttgggggcgtccctagttgtgtgtgtg-ggggggggttgccctcccaac 217
Query: 118 actggctgccaacatg 133
||||||||||||||||
Sbjct: 216 actggctgccaacatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 535
Length adjustment: 8
Effective length of query: 125
Effective length of database: 527
Effective search space: 65875
Effective search space used: 65875
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
