Query= MSMg01no325_e23.b1 MSMg01no325_e23.b1 CHROMAT_FILE:
MSMg01no325_e23.b1 PHD_FILE: MSMg01no325_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:48 2005
(244 letters)
>mm_chr10_110195437_110196080
Length = 644
Score = 429 bits (222), Expect = e-125
Identities = 240/248 (96%), Gaps = 4/248 (1%)
Strand = Plus / Plus
Query: 1 cctcaaactcatagagatccacctgcctctctgcctctcaagtgctaggattaaaggtgt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcgaactcatagagatccacctgcctctctgcctctcaagtgctaggattaaaggtgt 260
Query: 61 gcagtttgggtttaaaacatgtctcctcgtattcaactatcttgctaattcctctaattt 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 gcagtttgggtttaaaacatgtctcctcgtactcaactatcttgctaattcctctaattt 320
Query: 121 ttcagatttttatttttttgagggaacgatcatattcttttcaggatgaagagggtttgt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ttcagatttttatttttttgagggaacgatcataatcttttcaggatgaagagggtttgt 380
Query: 181 ttgtgttttccagtcctttgcctcagtttctgcttactgacctaacatact----aggat 236
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 381 ttgtgttttccagtcctttgcctcagtttctgcttactgtcctaacatacttactaggat 440
Query: 237 ttcccaca 244
||||||||
Sbjct: 441 ttcccaca 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no325_e23.g1 MSMg01no325_e23.g1 CHROMAT_FILE:
MSMg01no325_e23.g1 PHD_FILE: MSMg01no325_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:48 2005
(638 letters)
>mm_chr10_110372499_110373536
Length = 1038
Score = 1164 bits (602), Expect = 0.0
Identities = 629/638 (98%)
Strand = Plus / Minus
Query: 1 cttagacctgatcgcagaggaagaccagaccagggcccggctggaaggaacagacagggt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 838 cttagacctgatcgcagaggaagaccagaccagggcccggctggaagggacagacagggt 779
Query: 61 taccactgcacatagggcgtgcacacagagcttgcttattgctgggaaaggtggcaacag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 778 taccactgcacatagggcgtgcacacagagcttgcttattgctgggaaaggtggggacag 719
Query: 121 ggcagaaagagcatccatgatttcccagttctggctacaaacacagcctttgggggtctt 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ggcagaaagagcatccgtgatttcccagttctggctacaaacacagcctttgggggtctt 659
Query: 181 gtgaatttagttttcattgatgggaagatttagaggtaatgtatattgtgaaacatttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gtgaatttagttttcattgatgggaagatttagaggtaatgtatattgtgaaacatttgg 599
Query: 241 aatccctttggaatcagggatacacttaaaagagaatataagaagtacagtgcatttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 598 aatccctttggaatcagggatacacttaaaagagaatataagaagtacagtacatttcaa 539
Query: 301 cagtgtccaccaggggtaggttggctgtttctggaccatacagggagagcctgtttcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cagtgtccaccaggggtaggttggctgtttctggaccatacagggagagcctgtttcaaa 479
Query: 361 accagggacgaaagcaggaaggaaatagaggacgttccaagtgaccttcctgagcatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 accagggacgaaagcaggaaggaaatagaggacgttccaagtgaccttcctgagcatgga 419
Query: 421 aacgaacgaagcattaggtgacctgaacggaggacactctggttatcagagtgacacacc 480
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aatgaacgcagcattaggtgacctgaacggaggacactctggttatcagagtgacacacc 359
Query: 481 tttggttatcagaactcaagactggcttcgcatttgtccctcaaatcatcagaagcagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tttggttatcagaactcaagactggcttcgcatttgtccctcaaatcatcagaagcagga 299
Query: 541 aatggttttaatttctaagttgaaggatcgtaatttcctgaggaaagagtgactaaggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aatggttttaatttctaagttgaaggatcgtaatttcctgaggaaagagtgactaaggac 239
Query: 601 tttccgtggacggcttaattgcatacgagaagcatctc 638
||||||||||| ||||||||||||| ||||||||||||
Sbjct: 238 tttccgtggacagcttaattgcatatgagaagcatctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
