Query= MSMg01no325_g07.b1 MSMg01no325_g07.b1 CHROMAT_FILE:
MSMg01no325_g07.b1 PHD_FILE: MSMg01no325_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:54 2005
(599 letters)
>mm_chr10_123421732_123422731
Length = 1000
Score = 1027 bits (531), Expect = 0.0
Identities = 580/599 (96%), Gaps = 7/599 (1%)
Strand = Plus / Plus
Query: 5 gaattcttctggttaca---taa-aagtgctcttacctactgatccatctttcctgaccc 60
|||||||||||| || ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttctgg---cagaataacaagtgctcttacctactgatccatctttcctgaccc 261
Query: 61 ctcatgggctttaatgaagaagtgctggtggactttgttcagtaaagagaagaatggatg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 262 ctcatgggctttaatgaagaagtgctggtggactttgttcagtatagagaagactggatg 321
Query: 121 cacctgtttccaacatgcattttagtcacaatgaaccagcctccatgtaacgtgccagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cacctgtttccaacatgcattttagtcacaatgaaccagcctccatgtaacgtgccagta 381
Query: 181 acctaatctcactcaaaatgtgagaagcaacatgtgctaggtgtggtgagcttccccagg 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 382 acctaatctcactcaaaatgtgagaagcaaaatgtgctaggtgtggtgagcttccccagg 441
Query: 241 aagaacatacagcatatatacagctctgtagacaccagtgctagaaaggctgagcacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aagaacatacagcatatatacagctctgtagacaccagtgctagaaaggctgagcacaca 501
Query: 301 tcagtgaccccattcgtgagaaagttctgagagaatgaaggagggcatggggcccaggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcagtgaccccattcgtgagaaagttctgagagaatgaaggagggcatggggcccaggga 561
Query: 361 atgcccaattctgccgcccagctgccaacattcccattgtgtctcacagccaggttaagc 420
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atgcccaattctggtggggagctgccaacattcccattgtgtctcacagccaggttaagc 621
Query: 421 tgttacctggcaatggaggcagactttctttccttcagaaggcagaggacgatagaaatc 480
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 622 tgttccctggcaatggaggcagactttctttccttcagaaggcagaggaggatagaaatc 681
Query: 481 ttctggggcttaggagtcctgcttgagtcagggttacttttcccatatccgaagacagag 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 682 ttctggggcttaggagtcctgcttgagtcagggttaattttcccatatccgaagacagag 741
Query: 541 aagtgctctctcttttcagagtgtttgcaactgttagcgggtaaagctttgctgtaggg 599
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 742 aagtgctctctcttttcagagtgtttgcaactgttagtgggtaaagctttgctgtaggg 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_g07.g1 MSMg01no325_g07.g1 CHROMAT_FILE:
MSMg01no325_g07.g1 PHD_FILE: MSMg01no325_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:54 2005
(610 letters)
>mm_chr10_123566828_123567837
Length = 1010
Score = 1002 bits (518), Expect = 0.0
Identities = 527/530 (99%)
Strand = Plus / Minus
Query: 81 atatgtacatcacatgggttcctacagagtcccaagaatggcactggatccccaagaact 140
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 atatgtacatcacatgtgttcctacagagtcccaagaatggcactggatccccaagaact 951
Query: 141 gcatttacagattgttatgagccatcatatcatgctagggatcaaaatcaggtcctctgg 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 gcatttacagattgttatgagccatcatatcatgctagggatcaaaatcaggtcctctgg 891
Query: 201 aataatagcaagtacttttaactgctgagccaactatccagtcatacaaacccataacaa 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 aataatagcaagtacttttaactgctgagccaactatccagtcatacaaacccataacaa 831
Query: 261 tttaaaaatattttaaataacgtcaattggttcaaaacttttctctaaagaaggagcttt 320
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 830 tttaaaaatattttaaataacgtcaattggttcaaaaattttctctaaagaaggagcttt 771
Query: 321 gaaagatccattaataaaataattcccttacaaattgaaagagaaggcttataattataa 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gaaagatccattaataaaataattcccttacaaattgaaagagaaggcttataattataa 711
Query: 381 atattcgatatcttactgaagcaatatctaattacataaaaagtaattgatacttaaaat 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atattcgatatcttactgaagcaatatctaattacataaaaagtaattgatacttaaaat 651
Query: 441 tgtttaaaaatattttctagacatggcacatgactgttatgtcagcatttgatgcattaa 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tgtttaaaaatattttctagacatggcacatgactgttatgtcagcatttgatgcattaa 591
Query: 501 accaggcagatcagaacttcaggacttcaataccagccttagataatacagatgtgtttc 560
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 590 accaggcagatcagaacttcaggacttcaataccagccttagataatacaggtgtgtttc 531
Query: 561 aggcaaagtgtctagtggggaagtggaggaatgaagaaggagaaaggggt 610
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aggcaaagtgtctagtggggaagtggaggaatgaagaaggagaaaggggt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
