Query= MSMg01no326_b12.b1 MSMg01no326_b12.b1 CHROMAT_FILE:
MSMg01no326_b12.b1 PHD_FILE: MSMg01no326_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:44 2005
(685 letters)
>mm_chr10_18294776_18295859
Length = 1084
Score = 561 bits (290), Expect = e-164
Identities = 305/310 (98%), Gaps = 3/310 (0%)
Strand = Plus / Plus
Query: 21 agtctagaaacgaaaactagtcattgtgcttttatggaaatggttccaaggccctttcac 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 agtctagaaacgaaaactagtcattgtgcttttatggaaatggttccaaggccctttcac 280
Query: 81 ttgggtagattgcttttgttttcactttaattggcttggtgtgtagtccttcaaattaaa 140
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 281 ttgggtagattgcttttgttttcactttaaatggcttggtgtgtagtccttcaaattaaa 340
Query: 141 aaacctaatgtttgtggattgggtctgctatgcttcatgaggtataacattgaagaatat 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaacctaatgtttgtggattgggtctgctatgcttcatgaggtataacattgaagaatat 400
Query: 201 ctgtagtgcccttataatgtagaaatttgaggaccatagcctgaaacattgattgtttgg 260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 401 ctgtagtgcccttataatgtagaaatttgaggaccatagcctgaaacattgattgtctgg 460
Query: 261 tctgtttggttgaatccaaacaaactctcaaaaaagcaggtat-ttttttgtatttaaac 319
||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 461 tct-tttggttgaatccaaacaaactctcaaaaa-gcaggtatattttttgtatttaaac 518
Query: 320 acatcataga 329
||||||||||
Sbjct: 519 acatcataga 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1084
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1074
Effective search space: 724950
Effective search space used: 724950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_b12.g1 MSMg01no326_b12.g1 CHROMAT_FILE:
MSMg01no326_b12.g1 PHD_FILE: MSMg01no326_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:44 2005
(650 letters)
>mm_chr10_18460466_18461515
Length = 1050
Score = 1141 bits (590), Expect = 0.0
Identities = 611/622 (98%), Gaps = 8/622 (1%)
Strand = Plus / Minus
Query: 1 tttaccccgctggcttagagccctgccctccagactctcttagagcacttagtactttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tttaccccgctggcttagagccctgccctccagactctcttagagcacttagtactttgg 559
Query: 61 agttggcacacgcatacctatgacggaaggatcattgagaaacatcttgagtacaaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agttggcacacgcatacctatgacggaaggatcattgagaaacatcttgagtacaaagac 499
Query: 121 aaggcaagttaaagctgacccccctccccccaccacacagtttacttgctccatccatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaggcaagttaaagctgacccccctccccccaccacacagtttacttgctccatccatgg 439
Query: 181 aaggttcattggaagaataatggggtttgggctgatatgaaattatacagtcttaaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aaggttcattggaagaataatggggtttgggctgatatgaaattatacagtcttaaggac 379
Query: 241 cttgacttggtctttgtgaattgtctgtcatgctctacacggattttgggtgtccataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cttgacttggtctttgtgaattgtctgtcatgctctacacggattttgggtgtccataaa 319
Query: 301 cttagaccatcttatcccctacttagactgtgttaggagacccc----agcaacccttat 356
|||||||||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct: 318 cttagaccatcttatctcctacttagactgtgttaggaga----ggggagtaacccttat 263
Query: 357 tcagagtttcatggggggagcctggtgttgggattggtttcagctgtgaataggagataa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcagagtttcatggggggagcctggtgttgggattggtttcagctgtgaataggagataa 203
Query: 417 ccctagagtcacctgagaaaaagaaggggcttcaactgaagaattgctagatcagattgc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccctagagtcacctgagaaaaagaaggggcttcaactgaagaattgctagatcagattgc 143
Query: 477 tctgtgactatgttcacggggcattttcctaattgctaattgatagaggagggtccagac 536
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 142 tctgtgactatgttcacggggcattttcctaatcgctaattgatagaggagggtccagac 83
Query: 537 cactgtgagatgcctaggcaggtgggacatgagctgtgtgagagaggtagctgaatgtga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 cactgtgagatgcctaggcaggtgggacatgagctgtgtgagagaggtagctgaatgtga 23
Query: 597 gcctgcaacaacctgaaaagca 618
||||||||||||||||||||||
Sbjct: 22 gcctgcaacaacctgaaaagca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
