Query= MSMg01no327_k03.b1 MSMg01no327_k03.b1 CHROMAT_FILE:
MSMg01no327_k03.b1 PHD_FILE: MSMg01no327_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:34 2005
(642 letters)
>mm_chr10_69817974_69819015
Length = 1042
Score = 1038 bits (537), Expect = 0.0
Identities = 555/561 (98%)
Strand = Plus / Minus
Query: 78 ctggcttgctcagcttgcttttttaaagaacccaagactaccagcccagggatggcacca 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 ctggcttgctcagcttgcttttttaaagaacccaagactaccagcccagggatggcacca 983
Query: 138 cccacaatgggccctccccccttgatcactaattgagaaaatgccccacagctggatctc 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 cccacaatgggccctccccccttgatcactaattgagaaaatgccccacagctggatctc 923
Query: 198 atggaggcatttccttaagggaagcccctttctctgtgataactccagcctgtgtcaagt 257
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 922 atggaggcatttcctcaagggaagcccctttctctgtgataactccagcttgtgtcaagt 863
Query: 258 tgacacacaaaaccagccagtacaccatatgaaactgttctgtgctaaagccatgggaga 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tgacacacaaaaccagccagtacaccatatgaaactgttctgtgctaaagccatgggaga 803
Query: 318 taagaacaaagactgactggccatcccttagaaatgctcatgtgatgccagaccacgctg 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 802 taagaacaaagactgactggccatcccttagaaatgctcatgtgatgccagaccatgctg 743
Query: 378 cagtccaagcaagagaaataagaagacacatgctaagagagggtgccatagcacgtaaag 437
|||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 742 cagtccaatcaagagaaataagaagacacattctaagaaagggtgccatagcacgtaaag 683
Query: 438 ctgaaatggggtggcatcccctgtgcaagacagtgccatctgcaatggagatacccaaaa 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctgaaatggggtggcatcccctgtgcaagacagtgccatctgcaatggagatacccaaaa 623
Query: 498 cagccagactaccacttacaaataagtaccaacctctggaggaggtagaccagaactcca 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cagccagactaccacttacaaataagtaccaacctctggaggaggtagaccagaactcca 563
Query: 558 taaaagtaccagcttttcccccaccccctctggtcaatagtagcctaggaacttctttcc 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 taaaagtaccagcttttcccccaccccctctggtcaatagtagcctaggaacttctttcc 503
Query: 618 agttccagtgtgaaaactgat 638
|||||||||||||||||||||
Sbjct: 502 agttccagtgtgaaaactgat 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_k03.g1 MSMg01no327_k03.g1 CHROMAT_FILE:
MSMg01no327_k03.g1 PHD_FILE: MSMg01no327_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:34 2005
(572 letters)
>mm_chr10_69656833_69657808
Length = 976
Score = 1038 bits (537), Expect = 0.0
Identities = 565/577 (97%), Gaps = 6/577 (1%)
Strand = Plus / Plus
Query: 1 ctgataaccatttcagtgagtcaagtcgcttaaatccacctctgcccccc-----atttt 55
|||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 201 ctgataaccatttcagtgagtcaagtcgtttaaatccacc-ctgcccccccccccatttt 259
Query: 56 tttaaatgcgagaatttgccttgggtcacagaagacttctaaaggaattgacctttaggc 115
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 260 tttaaatgcgagaatttgccttgggtcagagaagacttctaaaggaattgacctttaggc 319
Query: 116 agggttcagaacaggtggttggaatctccgtcccaatttcacgagttggatgggggaggg 175
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 320 agggttcagaacaggtggttggagtctccgtcccaatttcacgagttggatgggggaggg 379
Query: 176 gctccagggagtggtcagtggcagaaaggaagtctgcccagggcaagcgagttggctgct 235
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gctccaaggagtggtcagtggcagaaaggaagtctgcccagggcaagcgagttggctgct 439
Query: 236 tatgtggtgtgtacccagtgggaattcccaagggagactttagtcaagcttcaggattgc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatgtggtgtgtacccagtgggaattcccaagggagactttagtcaagcttcaggattgc 499
Query: 296 cctacctgccgacgacgctgcagagccacctggtcctttgacccgttgcacaaaggtgac 355
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 500 cctacctgccgacgacgctgcagagccacctggtcctttgacccgttggagaaaggtgac 559
Query: 356 cctggacagaaggtttcttcatccacatccaggttctctgtgtttccagagtcctgtgag 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cctggacagaaggtttcttcatccacatccaggttctctgtgtttccagagtcctgtgag 619
Query: 416 gtggcaatgcttcgtgagggattccggcgaatgacaccataaaaagtcagatagttgggg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtggcaatgcttcgtgagggattccggcgaatgacaccataaaaagtcagatagttgggg 679
Query: 476 tgtcgggtagccatcaatcatcccctgacttggcctggagcattgatggagaattagaag 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtcgggtagccatcaatcatcccctgacttggcctggagcattgatggagaattagaag 739
Query: 536 gcatttttcttctttttttcttccttttttttttttt 572
|||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcatttttcttctttttttcttccttttttttttttt 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 976
Length adjustment: 10
Effective length of query: 562
Effective length of database: 966
Effective search space: 542892
Effective search space used: 542892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
