Query= MSMg01no327_n17.b1 MSMg01no327_n17.b1 CHROMAT_FILE:
MSMg01no327_n17.b1 PHD_FILE: MSMg01no327_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:50 2005
(666 letters)
>mm_chr10_67585410_67586475
Length = 1066
Score = 1133 bits (586), Expect = 0.0
Identities = 602/608 (99%), Gaps = 2/608 (0%)
Strand = Plus / Minus
Query: 1 atacatccccagccctttcaagtagtaccccatatatctgtcagagtactaatgtttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 atacatccccagccctttcaagtagtaccccatatatctgtcagagtactaatgtttcct 547
Query: 61 agtaaccaaccaattacaacatgagataatgtctccttgaggggaaaaaatgtaagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agtaaccaaccaattacaacatgagataatgtctccttgaggggaaaaaatgtaagaatt 487
Query: 121 taggagaaaggtttaaatggacaggtgatgtaaatactagatatgtaaatattaggtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 taggagaaaggtttaaatggacaggtgatgtaaatactagatatgtaaatattaggtaat 427
Query: 181 ataaatactcaggaccagtccaaaacgcaagcatcaaatttgtagacgtgttactgtatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ataaatactcaggaccagtccaaaacgcaagcatcaaatttgtagacgtgttactgtatg 367
Query: 241 tctgtccaaagccaggtctctggagttctctctggctatgaacaagaacatcttaattgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tctgtccaaagccaggtctctggagttctctctggctatgaacaagaacatcttaattgg 307
Query: 301 cttgtttttgtttgtggttataaactattccaaaccttctggtttgaaccgcgcattatg 360
|||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||
Sbjct: 306 cttgtttttgtttgtggttataaactattccaaaccttctggtttgaattgtggattatg 247
Query: 361 gattgtttcattttggttcttcgtgatcttccaatttaaatttaaaagagagagacagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gattgtttcattttggttcttcgtgatcttccaatttaaatttaaaagagagagacagag 187
Query: 421 acagagagatggagacagagagagagagagagagagagagagagagagagagagagagag 480
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 acagagagatggagac--agagagagagagagagagagagagagagagagagagagagag 129
Query: 481 agagagagagagagagagagagagaaagagaagcagaagtttcattttaagtctggaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 agagagagagagagagagagagagaaagagaagcagaagtttcattttaagtctggaatg 69
Query: 541 ttgactgaccactgcacaaattctatgagccccttctgcctttactggaaatacagcaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ttgactgaccactgcacaaattctatgagccccttctgcctttactggaaatacagcaag 9
Query: 601 tgttgtat 608
||||||||
Sbjct: 8 tgttgtat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 122
Number of extensions: 41
Number of successful extensions: 41
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_n17.g1 MSMg01no327_n17.g1 CHROMAT_FILE:
MSMg01no327_n17.g1 PHD_FILE: MSMg01no327_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:50 2005
(625 letters)
>mm_chr10_67397929_67398953
Length = 1025
Score = 1180 bits (610), Expect = 0.0
Identities = 621/625 (99%)
Strand = Plus / Plus
Query: 1 aggttgccgggttagtggccaatgccattaaccaatgagcgatgcattgacctgattgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggttgccgggttagtggccaatgccattaaccaatgagcgatgcattgacctgattgtc 260
Query: 61 tacctttctatttatatacttctcttttttgtctttccttactcgaattgatggtctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacctttctatttatatacttctcttttttgtctttccttactcgaattgatggtctata 320
Query: 121 tagacctgtcttaaaacaacaaaaacaagatttttttttcattgctgagtgtcaagttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagacctgtcttaaaacaacaaaaacaagatttttttttcattgctgagtgtcaagttga 380
Query: 181 agatctaaccctaatctatacccctcaactgagtatataaactcttgtcctgaattaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatctaaccctaatctatacccctcaactgagtatataaactcttgtcctgaattaagg 440
Query: 241 ttcgatagtgaggattaaaggtccagacccttaattctagatctcactgagataacagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcgatagtgaggattaaaggtccagacccttaattctagatctcactgagataacagaa 500
Query: 301 ataaaggactcataaacagaatacaggagagaggctgtagcgactccccagggaaaagcc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ataaaggactcataaacagaatacaggagagaggctgtagcgactgggcagggaaaagcc 560
Query: 361 agtctgtgaaactggatttttactttgattagcttttacttatgacatacaaataagttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtctgtgaaactggatttttactttgattagcttttacttatgacatacaaataagttt 620
Query: 421 ggcattcagatctcacctggcttatgattaccatacagtcactacgtgacattggacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggcattcagatctcacctggcttatgattaccatacagtcactacgtgacattggacttt 680
Query: 481 accctcatgagaagaacaatctctgaaaactctgccctcagagggtatctttttccatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 accctcatgagaagaacaatctctgaaaactctgccctcagagggtatctttttccatat 740
Query: 541 gtatccctatcanagacctgagaattttacctacatgctcaaaattggcatataaccaac 600
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtatccctatcaaagacctgagaattttacctacatgctcaaaattggcatataaccaac 800
Query: 601 ctatgggtaattccatgtgcagacc 625
|||||||||||||||||||||||||
Sbjct: 801 ctatgggtaattccatgtgcagacc 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
