Query= MSMg01no328_i01.b1 MSMg01no328_i01.b1 CHROMAT_FILE:
MSMg01no328_i01.b1 PHD_FILE: MSMg01no328_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:40 2005
(617 letters)
>mm_chr10_31392934_31393950
Length = 1017
Score = 634 bits (328), Expect = 0.0
Identities = 334/336 (99%)
Strand = Plus / Minus
Query: 6 gaattcctggcatgctcacacgggtctccacaggacaagaaatttaactcagtgtttcct 65
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 385 gaattcctggcatgctcacacgggcctccacaggacaagaaatttaactcagtgtttcct 326
Query: 66 ctaagctgatcaaaagttgttgttgatagaaaagaacatttcttttagctatgagaaaca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctaagctgatcaaaagttgttgttgatagaaaagaacatttcttttagctatgagaaaca 266
Query: 126 ctgttaacaatggtaaattgtttatatcactgacaagttcaggtaaatttatacaatgta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgttaacaatggtaaattgtttatatcactgacaagttcaggtaaatttatacaatgta 206
Query: 186 aaggtttcaggccatttcaagtgatccttggcagtaactaattttaagttttccttagaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aaggtttcaggccatttcaagtgatccttggcagtaactaattttaagttttccttagaa 146
Query: 246 tgatgaccaatttgtcagtgtttttctctgccactcatataacttttatgctgtctttgt 305
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tgatgaccaatttgtcagtggttttctctgccactcatataacttttatgctgtctttgt 86
Query: 306 taaaggaagaattatctgttaagaatttaaatattt 341
||||||||||||||||||||||||||||||||||||
Sbjct: 85 taaaggaagaattatctgttaagaatttaaatattt 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_i01.g1 MSMg01no328_i01.g1 CHROMAT_FILE:
MSMg01no328_i01.g1 PHD_FILE: MSMg01no328_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:40 2005
(565 letters)
>mm_chr10_31271145_31272114
Length = 970
Score = 1040 bits (538), Expect = 0.0
Identities = 560/570 (98%), Gaps = 5/570 (0%)
Strand = Plus / Plus
Query: 1 agccttgagcagatgtttacttggcagcctagctgtactaattagtatcagaaaacaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccttgagcagatgtttacttggcagcctagctgtactaattagtatcagaaaacaggg 260
Query: 61 caattaaaaaaatcgacaaccagatctcaggtctgtaaatcatggt-----aaagggccc 115
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 caattaaaaaaatcgacaaccagatctcaggtctgtaaatcatggttctgtaaagggccc 320
Query: 116 aaccatctggatgactcagcccagtcctccattttgagaaaaagaagcatgacagtagag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccatctggatgactcagcccagtcctccattttgagaaaaagaagcatgacagtagag 380
Query: 176 aaagccaagggacctcagatcaccaggcactcacagcataatgtcccagagtgtgccctc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagccaagggacctcagatcaccaggcactcacagcataatgtcccagagtgtgccctc 440
Query: 236 ttaagccacagccgtttctctatctcggagaaactgatttaacagtctcaagacttcttt 295
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 ttaagccacagccgtttctctatctcggagaagctgatttaacagtctcaagacttcttt 500
Query: 296 gtgtggattaccgatttctcatagggacaagatgcagtttttgtttaatcttacctccct 355
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 501 gtgtggattaccgatttctcatagggacaagatgcagtttttgtttaatcttaatttcct 560
Query: 356 acataacaccagaacctgtcctgcatacaagaagcaggacgtagtatttacttattgaca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acataacaccagaacctgtcctgcatacaagaagcaggacgtagtatttacttattgaca 620
Query: 416 taaattgaaacagaataatcaaaatcttggcagacatatgtccccaggccaaagacagga 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaattgaaacagaataatcaaaatcttggcagacatatgtccccaggccaaagacagga 680
Query: 476 gataaacatctctgtctaaagtcctgttgtagggcacaggacgttcgctccagcccattg 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 gataaacatctctgtctaaagtcctgttgtagggcacaggacgttcgctccagcccgttg 740
Query: 536 cactagagaagccacataaacgagggggag 565
||||||||||||||||||||||||||||||
Sbjct: 741 cactagagaagccacataaacgagggggag 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 970
Length adjustment: 10
Effective length of query: 555
Effective length of database: 960
Effective search space: 532800
Effective search space used: 532800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
