Query= MSMg01no328_k15.b1 MSMg01no328_k15.b1 CHROMAT_FILE:
MSMg01no328_k15.b1 PHD_FILE: MSMg01no328_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:52 2005
(652 letters)
>mm_chr10_100825046_100826097
Length = 1052
Score = 957 bits (495), Expect = 0.0
Identities = 553/583 (94%), Gaps = 21/583 (3%)
Strand = Plus / Minus
Query: 5 gaattctaggggtatgtc-cttcctgtggccttgcgtggaagacaatctgctcatggatc 63
|||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gaattctaggagtatg-cacttcctgtggccttgcgtggaagacaatctgctcatggata 516
Query: 64 cccacctccaatggttgtgccaagttcattacaagaaagcactcttacctcaagtgaggg 123
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cccacctacaatggttgtgccaagttcattacaagaaagcactcttacctcaagtgaggg 456
Query: 124 accagaggactttggagcaaaacctctctcttctttatctttttgattaacacacttctt 183
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 455 acgagaggactttggagcaaaacctctctcttcttcatctttttgattaacacacttctt 396
Query: 184 ccccctgatctgaactccttgtgttggcatgataaacacaggggtagctggacctctgga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ccccctgatctgaactccttgtgttggcatgataaacacaggggtagctggacctctgga 336
Query: 244 gaaagatgctaagcaaaggatggttccaattccttacagtacttcattcttaccagcatt 303
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 335 gaaggatgctaagcaaaggatggttccaattccttgcagtacttcattcttaccagcatt 276
Query: 304 cattggttaggtttaaaatccatgcaactccttcttacttataaaacctttattcagtga 363
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 275 cattggttaggtttaaaatccacgcaattccttcttacttataaaacctttattcagtga 216
Query: 364 taaagatata--------tccccccccacc---ttgtactggtaatagctgaattaaatt 412
|||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 215 taaagatatatttagtttt--------accttgttgtactggtaatagctgaattaaatt 164
Query: 413 ccccttacttttcattattcatactgatcttacttacattctaaaggatagtaatgtttg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ccccttacttttcattattcatactgatcttacttacattctaaaggatagtaatgtttg 104
Query: 473 tcttctttgtctttctttcagtaaatactccactgaagtaatttctaatgggcaatgtta 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tcttctttgtctttctttcagtaaatactccactgaagtaatttctaatgggcaatgtta 44
Query: 533 acctcagcataagttaccaaataggcttcaatattttttatta 575
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 acctcagcataagttaccaaataggcttcaatattttttatta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_k15.g1 MSMg01no328_k15.g1 CHROMAT_FILE:
MSMg01no328_k15.g1 PHD_FILE: MSMg01no328_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:52 2005
(348 letters)
>mm_chr10_100646372_100647119
Length = 748
Score = 673 bits (348), Expect = 0.0
Identities = 348/348 (100%)
Strand = Plus / Plus
Query: 1 ttcccggaattctgggtttatgaagttaaaattaattttggaatcaataagtattatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcccggaattctgggtttatgaagttaaaattaattttggaatcaataagtattatctc 260
Query: 61 ctttctcctttatatagacacatcactattcatgacaaatggcacatttaccctccaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttctcctttatatagacacatcactattcatgacaaatggcacatttaccctccaaaa 320
Query: 121 tataaagttcaaaaagtttttcccagtcttttatctatgaaagtttaatactagaattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataaagttcaaaaagtttttcccagtcttttatctatgaaagtttaatactagaattaa 380
Query: 181 ttatttttaattgtgtatttagaaggtgccttttacatgtagacaataacgtttgaaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatttttaattgtgtatttagaaggtgccttttacatgtagacaataacgtttgaaact 440
Query: 241 gagtctcaaagcaccaattttagcttaattaggtcatgtatttgttcaatggagagtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtctcaaagcaccaattttagcttaattaggtcatgtatttgttcaatggagagtttc 500
Query: 301 aatgtctctgctgcattcccgaaattacatgtccttatctgtaaaaac 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgtctctgctgcattcccgaaattacatgtccttatctgtaaaaac 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
