Query= MSMg01no328_l08.b1 MSMg01no328_l08.b1 CHROMAT_FILE:
MSMg01no328_l08.b1 PHD_FILE: MSMg01no328_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:56 2005
(411 letters)
>mm_chr10_113827372_113828179
Length = 808
Score = 723 bits (374), Expect = 0.0
Identities = 399/408 (97%), Gaps = 3/408 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgggattttattctgttatctgcagtaataattgttctctctgtctaatctct 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ggaattctgggattttattttgttatctgcagtaataattgttctctctgtctaatctct 549
Query: 64 atggctatccaacactacccgcattcaaagcaagagacaagttcctgtcttttctatatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atggctatccaacactacccgcattcaaagcaagagacaagttcctgtcttttctatatg 489
Query: 124 tcattatctggtgtctaatgctagcagtgagttctcacttgggtagataggtatgtccag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcattatctggtgtctaatgctagcagtgagttctcacttgggtagataggtatgtccag 429
Query: 184 tggttaggtacactgatatgagatttatttgagaagtaggtctctgtttaaactgtttac 243
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 428 tggttaggtacgctgatatgagatttatttgagaagtaggtctctgtttaaaatgttttc 369
Query: 244 tgtgcctttcatttgtcaacaaaagaactaaagtaacaaatggactaacgacaagcccta 303
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tgtgcctttcatctgtcaacaaaagaactaaagtaacaaatggactaacgacaagcccta 309
Query: 304 cactttttttttatttatgcctacttcagtctagttaactcagaaacacagcatacaata 363
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cac-ttttttttatttatgcctacttcagtctagttaactcagaaacacagcatacaata 250
Query: 364 taaccaaaaaaaacccaccattgcaatatattctttaatatattgtct 411
||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 249 taaccaaaaaaaa--aaccattgcaatatattctttaatatattgtct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 808
Length adjustment: 9
Effective length of query: 402
Effective length of database: 799
Effective search space: 321198
Effective search space used: 321198
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_l08.g1 MSMg01no328_l08.g1 CHROMAT_FILE:
MSMg01no328_l08.g1 PHD_FILE: MSMg01no328_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:56 2005
(156 letters)
>mm_chr10_113781051_113781606
Length = 556
Score = 302 bits (156), Expect = 8e-87
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 1 ctcttttccttttatgaaactgaagtacaatgtggagtcacatgctgtagcatttcaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcttttccttttatgaaactgaagtacaatgtggagtcacatgctgtagcatttcaaga 260
Query: 61 attgtactttctgttccagatgattttggtttttattttgggggggaatgttttctgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtactttctgttccagatgattttggtttttattttgggggggaatgttttctgctt 320
Query: 121 ccatgcgaattttagtcattttttcttatttattga 156
||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatgcgaattttagtcattttttcttatttattga 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 556
Length adjustment: 8
Effective length of query: 148
Effective length of database: 548
Effective search space: 81104
Effective search space used: 81104
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
