Query= MSMg01no330_l06.b1 MSMg01no330_l06.b1 CHROMAT_FILE:
MSMg01no330_l06.b1 PHD_FILE: MSMg01no330_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:28 2005
(316 letters)
>mm_chr10_39548440_39549155
Length = 716
Score = 576 bits (298), Expect = e-169
Identities = 309/314 (98%), Gaps = 3/314 (0%)
Strand = Plus / Minus
Query: 5 gaattcagattagagtaggctgataaataaatacaaagtaaataagcagagctgttttta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gaattcagattagagtaggctgataaataaatacaaagtaaataagcagagctgttttta 448
Query: 65 agagaatgtttttaccagaaagttggctttgaagaaggaaatttggcttgagatataagg 124
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agagaatgtttttaaaagaaagttggctttgaagaaggaaatttggcttgagatataagg 388
Query: 125 ttgagggaaatttttggttgtttctatattaatcagcaggaaagaggctggggatatacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttgagggaaatttttggttgtttctatattaatcagcaggaaagaggctggggatatacc 328
Query: 185 tcaatagtcaagtgtatgtataggccctgggtttttgagactcagaactgggaaaaacag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tcaatagtcaagtgtatgtataggccctgggtttttgagactcagaactgggaaaaacag 268
Query: 245 taacaaaaaggtggtggagatttgggtgtatgtgaaaaagccaatggggaaaatcaagtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 taacaaaaaggtggtggagatttgggtgtatgtgaaaaagccaatggggaaaatcaagtt 208
Query: 305 c---aggtttctga 315
| ||||||||||
Sbjct: 207 cagaaggtttctga 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_l06.g1 MSMg01no330_l06.g1 CHROMAT_FILE:
MSMg01no330_l06.g1 PHD_FILE: MSMg01no330_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:28 2005
(239 letters)
>mm_chr10_39383508_39384146
Length = 639
Score = 418 bits (216), Expect = e-121
Identities = 230/238 (96%), Gaps = 6/238 (2%)
Strand = Plus / Plus
Query: 1 ctacaatggtgagttcaaggccaacctaggctacagctacagcacaaaaccttgtcttaa 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 207 ctacaatggtgagttcaaggccaacctaggctacagc------acaaaaccttgtcttaa 260
Query: 61 aacatagcaagcaagcaagcaaccacatcacagctctctgaacatctgattagttttata 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 aacatagcaagcaagcaagcaaccacatcacagctctctgaacacctgattagttttata 320
Query: 121 atgtccttagttaccagggaaagattacatcaggtttgctctatcttgcttaagaaagca 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtccttagttatcagggaaagattacatcaggtttgctctatcttgcttaagaaagca 380
Query: 181 gttatgcatctcatttagaaggtttccctaagtgaagtcatttactaactcctctgtg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttatgcatctcatttagaaggtttccctaagtgaagtcatttactaactcctctgtg 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
