Query= MSMg01no330_p09.b1 MSMg01no330_p09.b1 CHROMAT_FILE:
MSMg01no330_p09.b1 PHD_FILE: MSMg01no330_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:47 2005
(325 letters)
>mm_chr10_56628494_56629218
Length = 725
Score = 605 bits (313), Expect = e-177
Identities = 322/325 (99%)
Strand = Plus / Plus
Query: 1 tttgacaacctcccatgtctggtgggatctgagttgttacctatgctcactaacttctga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tttgacaacctcccatgtctggtgggatctgagttgttacctatgctcactagcttctga 260
Query: 61 gaaaggagcacctatttaaagggagaggggtatgtggtcatcagaacatctatggttatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaggagcacctatttaaagggagaggggtatgtggtcatcagaacatctatggttatg 320
Query: 121 acagggatggcattctgaatgcaacttggctttggaaagacagtagcagaaactaaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 acagggatggcattctgaatgcaacttggctttggaaagacagtagcagaaaccaaacag 380
Query: 181 ctttggcttccttccattcttctgtcctgaagagagtcctaaagaatcttgtgttgtgtg 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttggcttccttccattcttctgtcctgaagagagtcctaaagaatcttgtgttgtgtg 440
Query: 241 gaagggaggccatgaagaaatggagggcgaggggacatagagaagaatatgctcaaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagggaggccatgaagaaatggagggcgaggggacatagagaagaatatgctcaaagag 500
Query: 301 tgttacatagttatatgaaaatatt 325
|||||||||||||||||||||||||
Sbjct: 501 tgttacatagttatatgaaaatatt 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_p09.g1 MSMg01no330_p09.g1 CHROMAT_FILE:
MSMg01no330_p09.g1 PHD_FILE: MSMg01no330_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:47 2005
(240 letters)
>mm_chr10_56778361_56779001
Length = 641
Score = 393 bits (203), Expect = e-114
Identities = 230/239 (96%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 3 tctttagtttggcaacaaactaattgcccc-aagataggtaccccttttgataactatga 61
|||||||||||||||||||||||||||||| |||||||||| | || ||||||||||||
Sbjct: 441 tctttagtttggcaacaaactaattgccccaaagataggtatcaattctgataactatga 382
Query: 62 aactatgatctggagggggtggtgagtgttagctaacatcactggaagttgataactcta 121
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactatgacctggaggggggggtgagtgttagctaacatcactggaagttgataactcta 322
Query: 122 cttaacaatgaacatattctgaagaatttctaatgctatgggcacggggtatgtttatgt 181
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 cttaacaatgaacatattctgaagaatttctaatgctatgggcacggggtgtgtttatgt 262
Query: 182 ggtgcatagttttgtggataacactttctcattctttcttttaatagaccatataattc 240
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ggtgcatagttttgtggataacactttctcattctttcttttaatagactatataattc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
