Query= MSMg01no331_e15.b1 MSMg01no331_e15.b1 CHROMAT_FILE:
MSMg01no331_e15.b1 PHD_FILE: MSMg01no331_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:10 2005
(304 letters)
>mm_chr10_73251836_73252538
Length = 703
Score = 542 bits (280), Expect = e-158
Identities = 295/302 (97%), Gaps = 5/302 (1%)
Strand = Plus / Minus
Query: 5 ggaattctttct--atttgacttcaaattattgacatccttacccatggatcttagaaag 62
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggaattctttctaaa---gacttcaaattattgacatccttacccatggatcttagaaag 447
Query: 63 gtgtttcttttccttattagagatctgatatctgtttgataagtgaacatgggaattaat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gtgtttcttttccttattagagatctgatatctgtttgataagtgaacatgggaattaat 387
Query: 123 tgacagatctaatacctggaagcctttaatcaacctttgcttggtgaaaattattctggt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgacagatctaatacctggaagcctttaatcaacctttgcttggtgaaaattattctggt 327
Query: 183 catcatgatagtgtgatagaagtatatagtcagatattaaagttagctgtactcaacaga 242
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 326 catcatgatagtgtgatagaagtatatagtcagatattgaagttagctgtactcaacaga 267
Query: 243 cacttcgaatagtacatatatcagcataacataaaatgttaatgtaacgaaatttgaaat 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 266 cacttcgaatagtacatatatcagcataacataaaatggtaatgtaacgaaatttgaaat 207
Query: 303 aa 304
||
Sbjct: 206 aa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 703
Length adjustment: 9
Effective length of query: 295
Effective length of database: 694
Effective search space: 204730
Effective search space used: 204730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_e15.g1 MSMg01no331_e15.g1 CHROMAT_FILE:
MSMg01no331_e15.g1 PHD_FILE: MSMg01no331_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:10 2005
(637 letters)
>mm_chr10_73082053_73083089
Length = 1037
Score = 1224 bits (633), Expect = 0.0
Identities = 636/637 (99%)
Strand = Plus / Plus
Query: 1 tctatggctacagtgcaagcacattaaagcttcaaagttgcttttagatgaatttattat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tctatggctacagtgcaagcacattaaagcttcaaagttgcttttaggtgaatttattat 260
Query: 61 ttatttattcaaataataaaaataaatagaaatacatggcttcattgattgttaataatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatttattcaaataataaaaataaatagaaatacatggcttcattgattgttaataatt 320
Query: 121 attataaacttcaagaatttgggttaaatttattgtaattagaaaatttctgttttctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attataaacttcaagaatttgggttaaatttattgtaattagaaaatttctgttttctct 380
Query: 181 caagatacacacatccctttttgtccaactaaaatataatctcaagaaacaatatagacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagatacacacatccctttttgtccaactaaaatataatctcaagaaacaatatagacc 440
Query: 241 atattttgtctatgttgtatttttaaaatgtgaggagggtgactgtgatgttagggtatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atattttgtctatgttgtatttttaaaatgtgaggagggtgactgtgatgttagggtatc 500
Query: 301 atcctgagtgaggtaacccaatcgcaaaggaactcgcacaatatgtactcactgatgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcctgagtgaggtaacccaatcgcaaaggaactcgcacaatatgtactcactgatgagt 560
Query: 361 ggatattagcccagaaacttaggatacccaagatataagatacaacttgccgaacgcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggatattagcccagaaacttaggatacccaagatataagatacaacttgccgaacgcatg 620
Query: 421 aaattcaagaagaacgaagaccaaagtgtggactttaccctttcttagaaatgggaacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaattcaagaagaacgaagaccaaagtgtggactttaccctttcttagaaatgggaacaa 680
Query: 481 aacacccatggaaggagttacagagacaaaatttggagctgtgacgaaaggatggaccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacacccatggaaggagttacagagacaaaatttggagctgtgacgaaaggatggaccat 740
Query: 541 ctagtgattgccatatgcagggatccatcccataatcagcttccaaatgctgacaccatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctagtgattgccatatgcagggatccatcccataatcagcttccaaatgctgacaccatt 800
Query: 601 gcatacactagcaagattttgctgaaaggacccagat 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcatacactagcaagattttgctgaaaggacccagat 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
