Query= MSMg01no331_f07.b1 MSMg01no331_f07.b1 CHROMAT_FILE:
MSMg01no331_f07.b1 PHD_FILE: MSMg01no331_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:13 2005
(662 letters)
>mm_chr10_103905982_103907043
Length = 1062
Score = 1203 bits (622), Expect = 0.0
Identities = 649/658 (98%), Gaps = 2/658 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctcagtgagcggg-acatgggtggcagcatttgggatgtaaataagtgcatga 62
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcagtgag-gggaacatgggtggcagcatttgggatgtaaataagtgcatga 262
Query: 63 ataagagacaaatcaataaataagtaaatgaagctgtaacttcaggggagattgtcattc 122
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ataagagacaaataaataaataagtaaatgaagctgtaacttcaggggagattgtcattc 322
Query: 123 caggggagtagagttcaatgagctagcattcagccaacacatcagcacaagaacagatag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caggggagtagagttcaatgagctagcattcagccaacacatcagcacaagaacagatag 382
Query: 183 gccaggttcaaaataaacagcatcaactgaggcttagcaatcacccttagaggtctgaag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gccaggttcaaaataaacagcatcaactgaggcttagcaatcacccttagaggtctgaag 442
Query: 243 cagtggacaaatgattgtgttgtcttagataatgagaatctaccttctgaagtactaaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagtggacaaatgattgtgttgtcttagataatgagaatctaccttctgaagtactaaat 502
Query: 303 agatagaaaaattatgctattttcatcactatgaaagaaactcagtcactgcctctgact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agatagaaaaattatgctattttcatcactatgaaagaaactcagtcactgcctctgact 562
Query: 363 ctattcccaccgcgagtctagagagattctcaaaggaaagagcagtgccacttgagaaag 422
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctattcccactgtgagtctagagagattctcaaaggaaagagcagtgccacttgagaaag 622
Query: 423 atgtcctataacatcatgcaaactttatgacaaaataagactttttcagtgaagctgagg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 623 atgtcctataacatcatgcaaactttatgacaaaataagactttttcagtgaagctgcgg 682
Query: 483 tgatttttcagaatgtttatgacttggtgattattttcctctagttctgtattatcttct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgatttttcagaatgtttatgacttggtgattattttcctctagttctgtattatcttct 742
Query: 543 ctccaagaaaacacaaaagttcactgttaggaaatacagaatggtgtttattaagctcta 602
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 743 ctccaagaaaacacaaaagttcactgttaggaaatacagagtggtgttgattaagctcta 802
Query: 603 aattaatagatactattttaagcaagcataaatggtgggtaactcttcaaatacatca 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 803 aattaatagatactattttaagcaagcataaatggcgggtaactcttcaaatacatca 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_f07.g1 MSMg01no331_f07.g1 CHROMAT_FILE:
MSMg01no331_f07.g1 PHD_FILE: MSMg01no331_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:13 2005
(645 letters)
>mm_chr10_104098180_104099224
Length = 1045
Score = 1123 bits (581), Expect = 0.0
Identities = 619/632 (97%)
Strand = Plus / Minus
Query: 1 agaagcagctaattgccctggggaccttcttttggcgtattgcccaatggtactctttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 agaagcagctaattgccctggggaccttcttttggcgtattgcccaatggtactctttgt 740
Query: 61 gggagaaacagcttcacacacagagcttcaaagcatctgggttgctgttctgaatgctac 120
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gggagaaacagcttcacacgccgagcttcaaagcatctgggttgctgttctgaatgctac 680
Query: 121 tgctgacggatttaccatctgcctttgagaaagacagcaatctagggaactttgatacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgctgacggatttaccatctgcctttgagaaagacagcaatctagggaactttgatacta 620
Query: 181 agcatccacacgatagccattgacagccgaaagccttccttaaataagagattaaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agcatccacacgatagccattgacagccgaaagccttccttaaataagagattaaaataa 560
Query: 241 actatgtatgaaccaaccaaattggaccacttttacttttgattatctacaaatatgatg 300
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 actatgtatgaaccgaccaaattggaccacttttacttttgattatctacaaatatgata 500
Query: 301 ttgaaatgatagcagaggatttattgagcattaactgctgatacaaacccttttatactt 360
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 499 ttgaaatgatagcagaggatttattgagcattaactgctgataccaattcttttatactt 440
Query: 361 tacatatctttatgggtagccacataatttggtgagtacaactttatctgtaccttaaat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tacatatctttatgggtagccacataatttggtgagtacaactttatctgtaccttaaag 380
Query: 421 ataagttcacccttttgggagaaaactacctgccgcaaggttactcgagacacagaaaaa 480
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 379 ataagttcacccttttgggagaaaactaactgccgcaaggttactcaagacacagaaaaa 320
Query: 481 agttaggatctaggtattcataatcagtattctgtatttatttaaatactaactttttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agttaggatctaggtattcataatcagtattctgtatttatttaaatactaactttttat 260
Query: 541 taattttctgtcatagcaaggttgtgttcttaatttctgggcaagggttgaatattttgn 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 taattttctgtcatagcaaggttgtgttcttaatttctgggcaagggttgaatattttgt 200
Query: 601 aggtctctctctctctctctctctctctctct 632
|||||||| ||||||||| |||||||||||||
Sbjct: 199 aggtctctttctctctctgtctctctctctct 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 11
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
