Query= MSMg01no331_i19.b1 MSMg01no331_i19.b1 CHROMAT_FILE:
MSMg01no331_i19.b1 PHD_FILE: MSMg01no331_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:28 2005
(514 letters)
>mm_chr10_29689492_29690404
Length = 913
Score = 905 bits (468), Expect = 0.0
Identities = 498/508 (98%), Gaps = 1/508 (0%)
Strand = Plus / Minus
Query: 7 gaattccagaatcttacatcttgacgatgtttaactacttaaaacttggtgccacattta 66
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 713 gaattccagaatcttacatctttacaatgtttaactacttaaaacttggtgccacattta 654
Query: 67 tttccttctttgacatcatgctctcttatgttcccagttgtatgtatccattttgtactg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tttccttctttgacatcatgctctcttatgttcccagttgtatgtatccattttgtactg 594
Query: 127 ttacttccttctttagatatttgtcctagtgcaaatgtgtgtgagtaaataataaccaca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttacttccttctttagatatttgtcctagtgcaaatgtgtgtgagtaaataataaccaca 534
Query: 187 gatgtttcagtgcagacactgaacacaacgaatcagcctgaactagaaatgttattccac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gatgtttcagtgcagacactgaacacaacgaatcagcctgaactagaaatgttattccac 474
Query: 247 ttacatattcttgtattctatagttgtaatgcagttatgcttcttgtatcatcaaccagt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttacatattcttgtattctatagttgtaatgcagttatgcttcttgtatcatcaaccagt 414
Query: 307 agaaaattggtttctgtggttgtttttttatttttaactacaagttttgctagaaatgga 366
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 413 agaaaattggtttctgtggttgtttttttatttttaactacaagttttgatagaaatgga 354
Query: 367 ggcctccccccacacatttacccagcttctctattttccaaataaacacatctagactga 426
|||||| | | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggcctctcattagatatttacccagcttctctattttccaaataaacacatctagactga 294
Query: 427 cttctaaacccatgtgaaatgaaactgtttagttacattctttaaacggccttttcctag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cttctaaacccatgtgaaatgaaactgtttagttacattctttaaacggccttttcctag 234
Query: 487 gaaaatccttttttttttttctttttgg 514
||||||||||||||||||| ||||||||
Sbjct: 233 gaaaatccttttttttttt-ctttttgg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 913
Length adjustment: 10
Effective length of query: 504
Effective length of database: 903
Effective search space: 455112
Effective search space used: 455112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_i19.g1 MSMg01no331_i19.g1 CHROMAT_FILE:
MSMg01no331_i19.g1 PHD_FILE: MSMg01no331_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:28 2005
(666 letters)
>mm_chr10_29521613_29522678
Length = 1066
Score = 1288 bits (666), Expect = 0.0
Identities = 666/666 (100%)
Strand = Plus / Plus
Query: 1 tctcgaattctcacagactcattgccactgagaagagatgccttgtaggagagtagattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcgaattctcacagactcattgccactgagaagagatgccttgtaggagagtagattt 260
Query: 61 tctcatggtttccttctgccacaagaggaggaagaatgctgcatttcaagggggaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcatggtttccttctgccacaagaggaggaagaatgctgcatttcaagggggaaatat 320
Query: 121 taccacattgcttgttcttgagatctctccagaagaaataccacaaaaatgctttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taccacattgcttgttcttgagatctctccagaagaaataccacaaaaatgctttctttt 380
Query: 181 accattcagactgaattctttgtgaatatatatcagcacagctcatatggtcagtatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accattcagactgaattctttgtgaatatatatcagcacagctcatatggtcagtatatt 440
Query: 241 gttcttttggaatccatggagtctctttacttggtagaggaagtggtcggaatgaatatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttcttttggaatccatggagtctctttacttggtagaggaagtggtcggaatgaatatg 500
Query: 301 aaaagtaaattcactggaaaaattctgtgtaatactgctctcatttacaaggtgaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaagtaaattcactggaaaaattctgtgtaatactgctctcatttacaaggtgaggaaa 560
Query: 361 aggttattcaaaagaataacaaagtaatagtgatttaaaaataacaagaactatatttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggttattcaaaagaataacaaagtaatagtgatttaaaaataacaagaactatatttac 620
Query: 421 tgtttaaaggctgatggtggtaatttacaccttagttctggaagaccattttttcgcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtttaaaggctgatggtggtaatttacaccttagttctggaagaccattttttcgcaaa 680
Query: 481 aaaatgacaatttgacaagatagtagttatttgcccttcccttctctgtgcatgagcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaatgacaatttgacaagatagtagttatttgcccttcccttctctgtgcatgagcaat 740
Query: 541 acttcaataaattaaacatagtaaaagaataaaaatagtaaaatcattcattaaaaagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acttcaataaattaaacatagtaaaagaataaaaatagtaaaatcattcattaaaaagga 800
Query: 601 tcatgtagagtaatggtattctaaaataatcaaacctacttattttgaacattactgcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcatgtagagtaatggtattctaaaataatcaaacctacttattttgaacattactgcat 860
Query: 661 tgcttg 666
||||||
Sbjct: 861 tgcttg 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
