Query= MSMg01no331_n18.b1 MSMg01no331_n18.b1 CHROMAT_FILE:
MSMg01no331_n18.b1 PHD_FILE: MSMg01no331_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:50 2005
(623 letters)
>mm_chr10_56193957_56194979
Length = 1023
Score = 1120 bits (579), Expect = 0.0
Identities = 611/623 (98%), Gaps = 3/623 (0%)
Strand = Plus / Plus
Query: 1 atactgctaaaaacagaggtgtcactagctgtcataagaactctgttcaggcaagtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atactgctaaaaacagaggtgtcactagctgtcataagaactctgttcaggcaagtttct 260
Query: 61 tctttgggcactgacattaataggttggccaggctgactttatctggtcattgtgattac 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctttgggcactgagattaataggttggccaggctgactttatctggtcattgtgattac 320
Query: 121 tcttcatgtaaacgttaatggatcaccaagaatacatttcagatggtagaacatttgcct 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tcttcatgtaaacgttaatggatcaccaagaatgcatttcagatggtagaacatttgcct 380
Query: 181 agcatgcacaatgccttgggctccatccttaatacagcataagatcgggtgtgttggttc 240
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |
Sbjct: 381 agcatgcacaatgccttgggctccgtccttaatacagcataagatcgggtg---tggtac 437
Query: 241 aggcccttaatcctagcatttgagaggtagaaacaggcagatcagggagatcaagttatc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aggcccataatcctagcatttgagaggtagaaacaggcagatcagggagatcaagttatc 497
Query: 301 cttagttacttggtaagttcaaggccaggctgggatatgtgagaacctgtctcaatgggg 360
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 498 cttagttacttggtaagttcaaggccagactgggatatgtgacaacctgtctcaatgggg 557
Query: 361 gaggggagacagaattcagcttctactcatattcaacttttatcccaacagcacggctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gaggggagacagaattcagcttctactcatattcaacttttatcccaacagcacggctct 617
Query: 421 ctgtcctttgtggaatgcacatcactgagtgaagagaacaattcctgggagagagtgtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctgtcctttgtggaatgcacatcactgagtgaagagaacaattcctgggagagagtgtgt 677
Query: 481 tgcactttcgtttccagcaccagttctgagcacggagcaagtaaccccaagcacacctat 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 678 tgcactttcgtttccagcaccagttctgtgcacggagcaagtaaccccaagcacacctat 737
Query: 541 caggaaactggaaagccactcagtccttcaggggtttctcaagacctactagacatggca 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 738 caggaaactggaaagccactcagtccttcaggtgtttctcaagacctactagacatggca 797
Query: 601 ttggactatgtatgcggatggtg 623
|||||||||||||||||||||||
Sbjct: 798 ttggactatgtatgcggatggtg 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_n18.g1 MSMg01no331_n18.g1 CHROMAT_FILE:
MSMg01no331_n18.g1 PHD_FILE: MSMg01no331_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:50 2005
(399 letters)
>mm_chr10_56352315_56353113
Length = 799
Score = 752 bits (389), Expect = 0.0
Identities = 395/399 (98%), Gaps = 4/399 (1%)
Strand = Plus / Minus
Query: 1 ctttaagtaaatcccacaaaaacccatatgacctagatcatactgtccccctatttacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctttaagtaaatcccacaaaaacccatatgacctagatcatactgtccccctatttacca 507
Query: 61 agaaaatgaaacaaagttctgtgacacaagcaaattggaaggaaaaccccccaaacaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agaaaatgaaacaaagttctgtgacacaagcaaattggaaggaaaaccccccaaacaatc 447
Query: 121 atttgtttttaaatgacattctaaatggggaggcaaagttgcctcaggcataaaaggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atttgtttttaaatgacattctaaatggggaggcaaagttgcctcaggcataaaaggtaa 387
Query: 181 aatcagattcatttccatcctatcaaaataatattttaattatctcttttatttttgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aatcagattcatttccatcctatcaaaataatattttaattatctcttttatttttgaaa 327
Query: 241 ttgtaatatgatgactttattatattattcctgcttctcttttctctctccaaactctac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttgtaatatgatgactttattatattattcctgcttctcttttctctctccaaactctac 267
Query: 301 catatatctctccatggtctctttaaaatttatggcttttttttcactaattggttttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 catatatctctccatggtctctttaaaatttatggcttttttttcactaattggttttat 207
Query: 361 atgagttatatatatatatatatgtgtgtgtgtgtatat 399
||||||||||||||||||| ||||||||||||||||
Sbjct: 206 atgagttatatatatatat----gtgtgtgtgtgtatat 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
