CATXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCTGAGGAGCCGCGGAA
TTCTGCATATTACAAAAAAAGGAATATGCTGTACAGTCAGTCTAAGACTG
ATGTGTGAATTGCTCTCGCATGATCCACTTTGAAATTTCAGGGTAAATAG
CAGGAAGAAATTGTACAGTGCTGTTGGTAGATATCTGAAAGACTCTACCA
AAATGGAAACACTTCTACATAAAATCTCTTTTTAAGAGCTAATTAAAAAT
TGTTTATTAGAACTCAAAAACTCAAATTATCATTGCTCTGTCCAAAATAA
AAATAATGACCTATTATTTCAACGCAGAGCATAATAAAGCTAATAATAAG
GTTACAGAAAATCTAGAGTTAACAAAGATATTGGTCGCAATCAGGTTTTC
AAGTTTGGTGTCTCTTCTGAGGAACTGGAACTAAATGCTCTGTTTTTCAT
ACGTCTAGAACATATTTATTCTAATGGACATGTTCAATGTTCCAAGTTCA
GAGTTCACACCTGAGAGCTATGCAATCAAGTTAAGAAAAATTGCACACAC
ACACACACACACACACACACAAATTCACATCAAAGACTCCCATACATGTT
TTTAAGAAAGATTCCAATTTGAGGTTTAACTATATTCATAGATATTCTGG
GCTGCAAGAGGCTCACGGTTCACAGGTTGTTCATATATCACTCTGTAATC
TCTGGAAACAGAGAACAAAATGTAAGCCCCCCCCTTTCTCAAAAAGAN

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCAGAG
AAACACCTGAAAAAATGTTCAACATTCTTAATCATCAGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATC
AGTCTTGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGAAACTCATACAATATGTACTCACTGATAAGTG
GATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTA
AACACATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTA

Query= MSMg01no331_p12.b1 MSMg01no331_p12.b1 CHROMAT_FILE:
MSMg01no331_p12.b1 PHD_FILE: MSMg01no331_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:58 2005
         (664 letters)



>mm_chr10_105549320_105550383
          Length = 1064

 Score = 1083 bits (560), Expect = 0.0
 Identities = 599/626 (95%), Gaps = 22/626 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatatgctgtacagtcagtctaagactgatgtgtgaattgctctcgcatgatccactttg 60
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 626 aatatgctgtacagtcagtctaagactgatgtgtgaattgctctcatatgatccactttg 567

                                                                       
Query: 61  aaatttcagggtaaatagcaggaagaaattgtacagtgctgttggtagatatctgaaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaatttcagggtaaatagcaggaagaaattgtacagtgctgttggtagatatctgaaaga 507

                                                                       
Query: 121 ctctaccaaaatggaaacacttctacataaaatctctttttaagagctaattaaaaattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctctaccaaaatggaaacacttctacataaaatctctttttaagagctaattaaaaattg 447

                                                                       
Query: 181 tttattagaactcaaaaactcaaattatcattgctctgtccaaaataaaaataatgacct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttattagaactcaaaaactcaaattatcattgctctgtccaaaataaaaataatgacct 387

                                                                       
Query: 241 attatttcaacgcagagcataataaagctaataataaggttacagaaaatctagagttaa 300
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 386 atgatttcaacgcagagcataataaagctaataataaggttacagaaaatctagagttac 327

                                                                       
Query: 301 caaagatattggtcgcaatcaggttttcaagtttggtgtctcttctgaggaactggaact 360
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caaagatattggtcgcaaacaggttttcaagtttggtgtctcttctgaggaactggaact 267

                                                                       
Query: 361 aaatgctctgtttttcatacgtctagaacatatttattctaatggacatgttcaatgttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaatgctctgtttttcatacgtctagaacatatttattctaatggacatgttcaatgttc 207

                                                                       
Query: 421 caagttcagagttcacacctgagagctatgcaatcaagttaagaaaaattgcac------ 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct: 206 caagttcagagttcacacctgagagctatgcaatcaagttaagaaaaattgcacgcacgc 147

                                                                       
Query: 475 ----------------acacacacacacacacacacacacaaattcacatcaaagactcc 518
                           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 acacacacacacacacacacacacacacacacacacacacaaattcacatcaaagactcc 87

                                                                       
Query: 519 catacatgtttttaagaaagattccaatttgaggtttaactatattcatagatattctgg 578
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  catacatgtttttaagaaagattccaatttgaggtttaactatattcatagatattctgg 27

                                     
Query: 579 gctgcaagaggctcacggttcacagg 604
           ||||||||||||||||||||||||||
Sbjct: 26  gctgcaagaggctcacggttcacagg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)