NNNGGCGGGTTCTNNNNNCCATTGGGCGCATAGACTCCTATGGGAGAGGA
TCCGCGGAATTCGTTCCAACCAAACACCCTACCTAGCCTGAAGTTNGAGN
AANAGTAATACAGGGACTCCTACAAAGGACCCGGNNNAAAGACTTGAATC
AGGAGGAGTCTAAGGAGTCGCAAGGTCAACTTGGTGCAGGCTGACGCCCG
CATGCACGCCGAGGTGTGCTACAGGAAGGGCGCAACCACACGCCGGCCCT
TCTGCAAGATGGAGCCTGGGGACACCGGCAGCCTCGTCCTGCCTCCAACG
ACAGACATTAAAGCCCTCAATGCCTACGGACAAGCCTTCCGGGCCTGTAA
GGAGAGGGCAGCGGTACCTCCACGGCTACTCACCGCGCGCTCGCCATCTT
GCTTCAATCTGTGTCCTAAAGGCGCCGGCCAGTGCGCGCTATACGCGCGC
GAGGCACTCTGGGAGTTGTAGTCTCTGCCAGGAAAGTAGCCCTAGTTGCA
GAAAGAAGGCGGGGCGGGCAGCTGTGGCCAGGCTGCATTTGTTGTGGCCC
CTTGGACTCAGGATTCCCAAAGGTGCCCAGACAACAAAATCGCTACCCTC
CCGATTTTAGTAGCAGGAACTATTTAAAATAACATCAAAACCAATGTTAT
ACTATTATTCAGAGAATATTAACATTCTCTAAAATTTATGAGCCTATTGG
CACCAAATTCAGCTCCAAACCAAATGGATGAATGTGTTTTTTATAATGGA
TCAATTAAGTTTTCTCAGAGAAGACAAAATGCCAGAGAATTCATATGAGG
GGGCCAGGACTGATATATTTGAGATGAAACCTAGAGAAGCTTTCTCAACC
AATGGATCTGATAAATGTAGGAGCTAAAAGGAGAAAGTTCCCGGCGTGGG
TTTGTCCACCGACTAGGTTANTCACCACCTCCCAGAAAGAAAGACTGATT
AAACAGGTTNAAATTTCTGGTAAGGGGGGAAAGGATTCTTTTCCGACCGC
TGATTGGGGATTCCCTGAAACATGCAGCGGGGATTATGGAAGAAAAAAAT
TTTTTTTAATTAAGTTGGGTTAAATGATAATAGCCTAAATTAAGCTGGGT
ATGGATTTGGGTTAAATACTTAAACTGCTTTTAGTTTTCCCCCAACCCAT
AAGATTAAAAAAAATGGGGTATTTGACAATCTTAAACCCTCCGCATGGTG
GACCGGGGTGGTCTCATATACCCACAGGGTGTGTAACTCGAGGCACCTNG
CACCCCCCCCTTGTAGTTTATACTACATCTATATAAATCAT

NCCTCTCATTTTNNNAAGATGTGATGCTGGGGCGCCXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTATAACCCTTCTTGGCTGTCTG
TGAATGACAATCTTCTCCTGTATGGCTACCTCCGGATCAAGATGTAGACC
TCTTGGCTCCTCCAGCACCATGTCTGCCTGCTAGCTGCCACACTTCCCAC
CATGATGATAATGGACTGAACCTCTAAAACTGTAAGCCAGTCCCAATTAA
ATGTTAACCTTTATAAGAGTTGCCTTGGTCACAGTGTCTCTTCACAGCAA
CGAAACCCTAAGACACACAGGTTCTTGCTTCCAGCTTTGAAATCTCAGCA
TTGAGCAGAAAACACAGCCATCCCTCGGAAATGAACCAAACCCATCATTA
AAACCTGTGCTTGAAACCAGTAAGTTGAATGATTAGTTTATAAGGATACG
CAGCACACTGATGGAACACGGAAGACAATACCCCCAAGTGGGGACCTCAG
AAAGAACCTCTCTCTCACCCTGACCTCCCCCTGATCTTTTGTCTCTTCCC
CTGCATGTTCCTCCAGGGTGAGTCATAGAAATTAGAACCCCTTTCTGCAG
GAGCCAACCAGGAAGACCTAAAAGTATCATCCTTATCTTCGCCAGCCCTC
CTGTGTAACAGCTCCCCGTGAACAATGAAGATCTTCAATCCTGAAGGTCT
TGCTCCTTCACTCCCAGGAAGGAGACACAGTTCAACAGGGGAGCCCCAAA
GAATCCAGACAGGCCTTGCTGCTCATCACCACTCAGCTGCCTCAGTTCCT
CTCCTGTCCCATCACCTTCCTGCCACCATTAACAGCTAAGCCTTAGTGGG
GTACCAGGTCCTTTCTACCATATCTCTGCGTCTTTAATCTGAAGAGTCTT
GTGACTACTTAACTAGTCCTTTCTCTTGTTAACCTGTCTTTTATCTTAAG
AGTGTCATCATCTAGTGAGGGGTGAGGAAGGTGTGTCTTTCCTTTCCTAA
CACACCCAACAGAACCTTCAAGTTCATGGCTGAATTCATCCCTTCCTGGG
GGGGCCCACCAAAAAGCGATTATTGTAAATATAAGGAAAAGTTTCTAACC
TTCCTGAAACCCCCGACCTTTTAAAAAGGTCCCCTCTGTTTTGAGAACCC
CCACCCACAAATAATATATTTTTTTCATTCTCCCCCACTATTTTTTATAG
AAAGATGTCTTGTTCTCCCAAACCCCCAAAAATTTTCTTGGGGCTAATCC
CCAAATAAACCCCGATTTGGAGGGTGG

Query= MSMg01no332_h19.b1 MSMg01no332_h19.b1 CHROMAT_FILE:
MSMg01no332_h19.b1 PHD_FILE: MSMg01no332_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:59 2005
         (574 letters)



>mm_chr10_94964094_94965067
          Length = 974

 Score = 1087 bits (562), Expect = 0.0
 Identities = 571/574 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagacttgaatcaggaggagtctaaggagtcgcaaggtcaacttggtgcaggctgacgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagacttgaatcaggaggagtctaaggagtcgcaaggtcaacttggtgcaggctgacgc 260

                                                                       
Query: 61  ccgcatgcacgccgaggtgtgctacaggaagggcgcaaccacacgccggcccttctgcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgcatgcacgccgaggtgtgctacaggaagggcgcaaccacacgccggcccttctgcaa 320

                                                                       
Query: 121 gatggagcctggggacaccggcagcctcgtcctgcctccaacgacagacattaaagccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatggagcctggggacaccggcagcctcgtcctgcctccaacgacagacattaaagccct 380

                                                                       
Query: 181 caatgcctacggacaagccttccgggcctgtaaggagagggcagcggtacctccacggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatgcctacggacaagccttccgggcctgtaaggagagggcagcggtacctccacggct 440

                                                                       
Query: 241 actcaccgcgcgctcgccatcttgcttcaatctgtgtcctaaaggcgccggccagtgcgc 300
           |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 441 actcaccgcgcgctcgccatcttgcttcaatctgggtcctaaaggcgccgtccagcgcgc 500

                                                                       
Query: 301 gctatacgcgcgcgaggcactctgggagttgtagtctctgccaggaaagtagccctagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctatacgcgcgcgaggcactctgggagttgtagtctctgccaggaaagtagccctagtt 560

                                                                       
Query: 361 gcagaaagaaggcggggcgggcagctgtggccaggctgcatttgttgtggccccttggac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcagaaagaaggcggggcgggcagctgtggccaggctgcatttgttgtggccccttggac 620

                                                                       
Query: 421 tcaggattcccaaaggtgcccagacaacaaaatcgctaccctcccgattttagtagcagg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaggattcccaaaggtgcccagacaacaaaatcgctaccctcccgattttagtagcagg 680

                                                                       
Query: 481 aactatttaaaataacatcaaaaccaatgttatactattattcagagaatattaacattc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactatttaaaataacatcaaaaccaatgttatactattattcagagaatattaacattc 740

                                             
Query: 541 tctaaaatttatgagcctattggcaccaaattca 574
           ||||||||||||||||||||||||||||||||||
Sbjct: 741 tctaaaatttatgagcctattggcaccaaattca 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no332_h19.g1 MSMg01no332_h19.g1 CHROMAT_FILE:
MSMg01no332_h19.g1 PHD_FILE: MSMg01no332_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:59 2005
         (703 letters)



>mm_chr10_95112218_95113320
          Length = 1103

 Score = 1274 bits (659), Expect = 0.0
 Identities = 692/703 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    gatcaagatgtagacctcttggctcctccagcaccatgtctgcctgctagctgccacact 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gatcaagatgtagacctcttggctcctccagcaccatgtctgcctgctagctgccacact 1021

                                                                        
Query: 61   tcccaccatgatgataatggactgaacctctaaaactgtaagccagtcccaattaaatgt 120
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1020 tcccaccatgatgataatggactgaacctctaaaactgtaagccagccccaattaaatgt 961

                                                                        
Query: 121  taacctttataagagttgccttggtcacagtgtctcttcacagcaacgaaaccctaagac 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 960  taacctttataagagttgccttggtcacagtgtctcttcacagcaacgaaaccataagac 901

                                                                        
Query: 181  acacaggttcttgcttccagctttgaaatctcagcattgagcagaaaacacagccatccc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900  acacaggttcttgcttccagctttgaaatctcagcattgagcagaaaacacagccatccc 841

                                                                        
Query: 241  tcggaaatgaaccaaacccatcattaaaacctgtgcttgaaaccagtaagttgaatgatt 300
            | |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 840  ttggaaatgaaccaaacccatcgttaaaacctgtgcatgaaaccagtaagttgaatgatt 781

                                                                        
Query: 301  agtttataaggatacgcagcacactgatggaacacggaagacaatacccccaagtgggga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 780  agtttataaggatacgcagcacactgatggaacacggaagacaatacccccaaatgggga 721

                                                                        
Query: 361  cctcagaaagaacctctctctcaccctgacctccccctgatcttttgtctcttcccctgc 420
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 720  cctcagaaagaacctctctctcaccctgacctcctcctgatcttttgtctcttcccctgc 661

                                                                        
Query: 421  atgttcctccagggtgagtcatagaaattagaacccctttctgcaggagccaaccaggaa 480
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 660  atgttcctccagggtgagtcatagaaactagaacccctttctgcaggagccaaccaggaa 601

                                                                        
Query: 481  gacctaaaagtatcatccttatcttcgccagccctcctgtgtaacagctccccgtgaaca 540
            |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 600  gacctaaaagtatcatccttatcttcgccagccctcctgtgtaacagctaaccgtgaaca 541

                                                                        
Query: 541  atgaagatcttcaatcctgaaggtcttgctccttcactcccaggaaggagacacagttca 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540  atgaagatcttcaatcctgaaggtcttgctccttcactcccaggaaggagacacagttca 481

                                                                        
Query: 601  acaggggagccccaaagaatccagacaggccttgctgctcatcaccactcagctgcctca 660
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  acagaggagccccaaagaatccagacaggccttgctgctcatcaccactcagctgcctca 421

                                                       
Query: 661  gttcctctcctgtcccatcaccttcctgccaccattaacagct 703
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420  gttcctctcctgtcccatcaccttcctgccaccattaacagct 378


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space:   757449
Effective search space used:   757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)