Query= MSMg01no332_l20.b1 MSMg01no332_l20.b1 CHROMAT_FILE:
MSMg01no332_l20.b1 PHD_FILE: MSMg01no332_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:31 2005
(534 letters)
>mm_chr10_73316447_73317380
Length = 934
Score = 820 bits (424), Expect = 0.0
Identities = 438/443 (98%)
Strand = Plus / Plus
Query: 1 tatgganataagatattctctctaaaatgcaaaccaggaaagaccaagtaaatgaagtca 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatggacataagatattctctctaaaatgcaaaccaggaaagaccaagtaaatgaagtca 260
Query: 61 tggagattgagagaggagagctgagtcagttacccatttagaagcagctagtgaaatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 tggagattgagagaggagagctgagtcagttacccatttagaagcagctagagaaatgtg 320
Query: 121 ttcactccatgaaatggttttcaaggtcatctcttaggatgcaaccaaacataatacaga 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 ttcactccatgaaatggttttcaaggtcatctcttaagatgcaaccaaacataatacaga 380
Query: 181 aaggtcactgtgtgaagattttaggatagggtgtggcacccactcatatacactttctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggtcactgtgtgaagattttaggatagggtgtggcacccactcatatacactttctgc 440
Query: 241 ttctctgttctgtgagtactctttttctctataaatatctttagtagtaagcatattatg 300
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 441 ttctctgttctgtgagtactctttttctccagaaatatctttagtagtaagcatattatg 500
Query: 301 gatgcattgtttggtgtggtaacttcttaggcacaactggtaattagaatgttcagtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgcattgtttggtgtggtaacttcttaggcacaactggtaattagaatgttcagtgta 560
Query: 361 gctgtaaaagtgagcttttaatcctacccaatttgatgcctttagatttaaaggacctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctgtaaaagtgagcttttaatcctacccaatttgatgcctttagatttaaaggacctca 620
Query: 421 tatggttgttgatcacagtattt 443
|||||||||||||||||||||||
Sbjct: 621 tatggttgttgatcacagtattt 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_l20.g1 MSMg01no332_l20.g1 CHROMAT_FILE:
MSMg01no332_l20.g1 PHD_FILE: MSMg01no332_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:31 2005
(666 letters)
>mm_chr10_73497398_73498462
Length = 1065
Score = 1265 bits (654), Expect = 0.0
Identities = 663/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Minus
Query: 1 atgttatagtcacacattgtctggttgtttatttgttgttgttgttttttatagcatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 atgttatagtcacacattgtctggttgtttatttgttgttgttgttttttatagcatttc 930
Query: 61 actctttagcccaggttagactttaattctttatcctcttgccttagcctcataggtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 actctttagcccaggttagactttaattctttatcctcttgccttagcctcataggtgtt 870
Query: 121 agaagcatgctctatatatcatgctcccttcaggcatttcatgatgtgacatttttgaaa 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 agaagcatactctatatatcatgctcccttcaggcatttcatgatgtgacatttttgaaa 810
Query: 181 actctccaggacataaagatatttctatagagaggtttctaccatgcttctcgaggtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 actctccaggacataaagatatttctatagagaggtttctaccatgcttctcgaggtttc 750
Query: 241 tgtctagcttggggacaaaccaatattactgtccaaaaaaatcattcttatttagttggc 300
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 749 tgtctagcttggggacaaaccaatattactgtcc-aaaatatcattcttatttagttggc 691
Query: 301 tttgtaatcttgggcatgaaatctagaccttcatgaggttctatatcactgagctacatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tttgtaatcttgggcatgaaatctagaccttcatgaggttctatatcactgagctacatc 631
Query: 361 aagttaattttttttaatgtgacaaaattagtaactatcgaatttctctgaatgctaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aagttaattttttttaatgtgacaaaattagtaactatcgaatttctctgaatgctaaag 571
Query: 421 agaagagacacaaagtacatgagtaggacacaggaatataaattttcacccaactggaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 agaagagacacaaagtacatgagtaggacacaggaatataaattttcacccaactggaat 511
Query: 481 cacaacatagatgccatctcatcactaaataaaagagatttttaacatagaaactaaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cacaacatagatgccatctcatcactaaataaaagagatttttaacatagaaactaaatg 451
Query: 541 tgtcatatcagctgcttttaatatatggatgctttgggcattgtggaattaagtggacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgtcatatcagctgcttttaatatatggatgctttgggcattgtggaattaagtggacat 391
Query: 601 ttatgactcagaagaggaaagcagcacattaaagtgaaataagctaattcaattggaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttatgactcagaagaggaaagcagcacattaaagtgaaataagctaattcaattggaaaa 331
Query: 661 tgagtt 666
||||||
Sbjct: 330 tgagtt 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1065
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1055
Effective search space: 692080
Effective search space used: 692080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
