Query= MSMg01no334_m09.b1 MSMg01no334_m09.b1 CHROMAT_FILE:
MSMg01no334_m09.b1 PHD_FILE: MSMg01no334_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:18 2005
(347 letters)
>mm_chr10_25675258_25676007
Length = 750
Score = 542 bits (280), Expect = e-158
Identities = 327/350 (93%), Gaps = 14/350 (4%)
Strand = Plus / Minus
Query: 1 tatcctatcatactcattacaatgtaagtgatgggaagtcagtaaatttggccttccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 469 tatcctatcatactcattacaatgtaagtgatgggaagtcagtaaatttgggctgccccc 410
Query: 61 cc---ccccaggattcagcagagttcctattgttcacaggcagcttgagaataatatttg 117
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccacaccccaggattcagcagagttcctattgttcacaggcagcttgagaataatatttg 350
Query: 118 agaaaatccattcaaaatccaaaaacacactctatcacagctagttccctgttacgatca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 349 agaaaatccattcaaaatccaaaaacacactctatcacagctagttccctgttacaatca 290
Query: 178 gtgaaggatgaccctgccacaaggggaatcggtcttatgtgtgcagacatttgtcctggt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtgaaggatgaccctgccacaaggggaatcggtcttatgtgtgcagacatttgtcctggt 230
Query: 238 cctgagttgaggagatttaggggctgcagctggcagctagcaggaagaagccacagaagc 297
||||||||||||||| ||||||||||| | |||||||||||||||||
Sbjct: 229 cctgagttgaggagacagaggggctgcag--------t---aggaagaagccacagaatt 181
Query: 298 acggtgtcccacaacacagctgatccaaatgtcactggtgctgaggcgga 347
| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atggtgtcccacaacacagctgatccaaatgtcactggtgctgaggcgga 131
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 750
Length adjustment: 9
Effective length of query: 338
Effective length of database: 741
Effective search space: 250458
Effective search space used: 250458
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_m09.g1 MSMg01no334_m09.g1 CHROMAT_FILE:
MSMg01no334_m09.g1 PHD_FILE: MSMg01no334_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:18 2005
(327 letters)
>mm_chr10_25474367_25475094
Length = 728
Score = 557 bits (288), Expect = e-163
Identities = 318/328 (96%), Gaps = 1/328 (0%)
Strand = Plus / Plus
Query: 1 cttccgtctcctctgctgttgatttgaaaggagggttgagtgatttatagatgccccctt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 cttccatctcctctgctgttgatttgaaaggagggttgagtgatttatagatgggccctt 260
Query: 61 gactacctggcacattcaatttgtttctggaatattttgatattaaatgctttatttttg 120
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactacctgacacattctatttgtttctggaatattttgatattaaatgctttatttttg 320
Query: 121 tggaaactagttttattctggattattgtctttactgatattctgctttttcataacagt 180
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 tggaaactatttttattctggattattgtctttactgatattttgctttttcataacagt 380
Query: 181 gattgcctagttatgttaatttctataaattataagttggtcctatttt-cttgtagctt 239
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 gattgcctaattatgttaatttctataaattataagttggtcctatttttcttgtagctt 440
Query: 240 taattgattttcattgttcatagacagtatcttgatttgtagccttggttggcctactac 299
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taattgattttcattgttcagagacagtatcttgatttgtagccttggttggcctactac 500
Query: 300 tcactttgtaacccaagcagattccaaa 327
||||||||||||||||||||||||||||
Sbjct: 501 tcactttgtaacccaagcagattccaaa 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 728
Length adjustment: 9
Effective length of query: 318
Effective length of database: 719
Effective search space: 228642
Effective search space used: 228642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
