Query= MSMg01no334_o17.b1 MSMg01no334_o17.b1 CHROMAT_FILE:
MSMg01no334_o17.b1 PHD_FILE: MSMg01no334_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:30 2005
(594 letters)
>mm_chr10_83828192_83829185
Length = 994
Score = 1027 bits (531), Expect = 0.0
Identities = 550/561 (98%), Gaps = 8/561 (1%)
Strand = Plus / Minus
Query: 42 agataaagaattataatattagccaagtcataaagtagtctatggtctcatccttcatgt 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 994 agataaagaattataatattagccaagtcataaagtagtctatggtctcatcctttatgt 935
Query: 102 ctgtcatctttaaacacttctcatgtccccttacttccattatcatagaggaagaaactg 161
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 934 ctgtcatctttaaacacttctcatgtccccttacctccattatcatagaggaagaaactg 875
Query: 162 ttttggggaacaaaaggcaatgacttgcctaactaacccaactgtgaaactatgaagctg 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 ttttggggaacaaaaggcaatgacttgcctaactaacccaactgtgaaactatgaagctg 815
Query: 222 gactcacatgtg--------tgcctggctgcctggctgcctggcttctgagctgacaatg 273
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gactcacatgtgtgcctggctgcctggctgcctggctgcctggcttctgagctgacaatg 755
Query: 274 tttgtttcgttggtcacttagaacaatcctgaaactcagactccttgccaccttattcac 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tttgtttcgttggtcacttagaacaatcctgaaactcagactccttgccaccttattcac 695
Query: 334 acatacagttagatccttgcagggacccagataggtgtcatcaggaaggaagacacaggc 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 acatacagttagatccttgcagggacccagataggtgtcatcaggaaggaagacacaggc 635
Query: 394 caaagtcagtgtattgttcaaatatgaagaagagaacaacccttcccagttccccattgg 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 caaagtcagtgtattgttcaaatatgaagaagagaacaacccttcccagttccccattgg 575
Query: 454 tgttacgttctagaacatccagtctcagcagatggggaacatcagatgacgcagatgtcc 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tgttacgttctagaacatccagtctcagcagatggggaacatcagatgacgcagatgtcc 515
Query: 514 taactcttctcttgtggaatcggatagagggattcgcctctttgctgtgttgctcagaac 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taactcttctcttgtggaatcggatagagggattcgcctctttgctgtgttgctcagaac 455
Query: 574 tccagagcggcgacaggagtt 594
|||||||||| ||||||||||
Sbjct: 454 tccagagcggggacaggagtt 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_o17.g1 MSMg01no334_o17.g1 CHROMAT_FILE:
MSMg01no334_o17.g1 PHD_FILE: MSMg01no334_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:30 2005
(662 letters)
>mm_chr10_83636022_83637084
Length = 1063
Score = 1189 bits (615), Expect = 0.0
Identities = 651/663 (98%), Gaps = 1/663 (0%)
Strand = Plus / Plus
Query: 1 aaaatgtagttacataaaagtagtcaatgatatcttccattcgtgtggaggcctgagtct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aaaatgtagttacataaaaatagtcaatgatatcttccattcgtgtggagggctgagtct 260
Query: 61 gttatggttttaacatacatcatcttgtgatagcgaccactgtctccatttaacagggag 120
||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 261 gttatggttttaacatacatcatcttgtgatagagaccactgtctccacttaacagggaa 320
Query: 121 cagaatgaagcccaagccattctagtgatatattttagtggtacagagcctcagcagagc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 cagaatgaagcccaagccattctagtaatatattttagtggtacagagcctcagcagagc 380
Query: 181 catccttcatccgggcttaatgaatgagtgaacaccctgcattcctataagagaagtttc 240
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catccttcatcggggcttactgaatgagtgaacaccctgcattcctataagagaagtttc 440
Query: 241 ctgagcctgagttctggctgtcctgttttatctagacacagtgttcctggaggagcctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgagcctgagttctggctgtcctgttttatctagacacagtgttcctggaggagcctag 500
Query: 301 ctcttcccatcatcaaacttgggttcattgaagtgc-gtgagccttaggaactatgtgaa 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 ctcttcccatcatcaaacttgggttcattgaagtgctgtgagccttaggaactatgtgaa 560
Query: 360 gggttgaacctgttagagagaaaggcttgggtctcaaaaagtttatcctcaagctgcaga 419
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 gggttgaacctgttagagagaaaggcttgggtctcaaaaagtttgtcctcaagctgcaga 620
Query: 420 ggtaaagtcagggtctagacctgaaggagaaagggtggtagcaaaggctctgaagatcca 479
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 ggtaaaggcagggtctagacctgaaggagaaaaggtggtagcaaaggctctgaagatcca 680
Query: 480 gcaccgtggtgttttagagctggagctttgtggcgaaggcaggagtaagctgcaggactt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaccgtggtgttttagagctggagctttgtggcgaaggcaggagtaagctgcaggactt 740
Query: 540 tgacctgttaaccaacatttcctatcactataactttcaggttaagatggcttttaaaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgacctgttaaccaacatttcctatcactataactttcaggttaagatggcttttaaaaa 800
Query: 600 cttacttgctctttgggctggatagaaacttgagctgtttacactttttaccactttatt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttacttgctctttgggctggatagaaacttgagctgtttacactttttaccactttatt 860
Query: 660 aag 662
|||
Sbjct: 861 aag 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space: 686556
Effective search space used: 686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
