Query= MSMg01no336_e01.b1 MSMg01no336_e01.b1 CHROMAT_FILE:
MSMg01no336_e01.b1 PHD_FILE: MSMg01no336_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:16 2005
(304 letters)
>mm_chr10_60177491_60178195
Length = 705
Score = 582 bits (301), Expect = e-171
Identities = 304/305 (99%), Gaps = 1/305 (0%)
Strand = Plus / Plus
Query: 1 gtaaagttgctgcgtgaacccaacttggtgtctgtgtcgttcctgtcgctggccagagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaaagttgctgcgtgaacccaacttggtgtctgtgtcgttcctgtcgctggccagagta 260
Query: 61 ggacaacgacagggccctaagtctgagtactggccattgcagaggggacctcaaatccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacaacgacagggccctaagtctgagtactggccattgcagaggggacctcaaatccag 320
Query: 121 gagcctctcttagaacagggagccctgagattctctcccacctcaatgtcagctggaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcctctcttagaacagggagccctgagattctctcccacctcaatgtcagctggaaag 380
Query: 181 agtgaggctggcttctggccttgtgacaatacaaattagagatgggctacttatgagcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgaggctggcttctggccttgtgacaatacaaattagagatgggctacttatgagcta 440
Query: 241 tgactgtaacataccccactctttacaattgcgtctttttttttt-gagacagtgtctcc 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tgactgtaacataccccactctttacaattgcgtctttttttttttgagacagtgtctcc 500
Query: 300 tgtag 304
|||||
Sbjct: 501 tgtag 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 705
Length adjustment: 9
Effective length of query: 295
Effective length of database: 696
Effective search space: 205320
Effective search space used: 205320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_e01.g1 MSMg01no336_e01.g1 CHROMAT_FILE:
MSMg01no336_e01.g1 PHD_FILE: MSMg01no336_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:16 2005
(424 letters)
>mm_chr10_60359697_60360519
Length = 823
Score = 700 bits (362), Expect = 0.0
Identities = 409/430 (95%), Gaps = 13/430 (3%)
Strand = Plus / Minus
Query: 1 aacgccctcttctggactctgaggacacctgggtacatgtactgcacagaaacgtacgga 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aacgccctcttctggaccctgaggacacctgggtacatgtactgcacagaaacgtacgga 496
Query: 61 ggtgcacacatatatacagggctaaggtaaataagtcctttttaagtacaaatgttgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggtgcacacatatatacagggctaaggtaaataagtcctttttaagtacaaatgttgtga 436
Query: 121 agggaggtcaggagattttagacatatgataaaacatgtattatatgtgttttatgtatt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 agggagatcaggagattttagacatatgataaaacatgtattatatgtgttttatgtatt 376
Query: 181 ataggatgaatcactgctttgaggttggttaggacaccatgccaggaatgagggcaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ataggatgaatcactgctttgaggttggttaggacaccatgccaggaatgagggcaatct 316
Query: 241 cattg-----tttttatggacagtcctagctggcagaaaccacggaaatgagggccctga 295
|| | |||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 315 ca--ggaagc----tatgaacagtcctagctggcagaaaccacagaaatgagggccctga 262
Query: 296 ggcgagagcaataagaactgaggttgtgccaggtggtggtggcacacgcctttaatccca 355
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ggcgagagcaataagaactgaggttgtgccaggtggtggtggcacacacctttaatccca 202
Query: 356 gcacttgggaggaagaggcaggcagatctctgcaattttgaggctagccctg-tctacag 414
|||||||||||| ||||||||||||||||||| |||||||||||||||| || |||||||
Sbjct: 201 gcacttgggaggcagaggcaggcagatctctgtaattttgaggctagcc-tgatctacag 143
Query: 415 cgtttgagga 424
|||||||||
Sbjct: 142 tgtttgagga 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 823
Length adjustment: 9
Effective length of query: 415
Effective length of database: 814
Effective search space: 337810
Effective search space used: 337810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
