Query= MSMg01no337_p06.b1 MSMg01no337_p06.b1 CHROMAT_FILE:
MSMg01no337_p06.b1 PHD_FILE: MSMg01no337_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:28 2005
(519 letters)
>mm_chr10_127191482_127192402
Length = 921
Score = 949 bits (491), Expect = 0.0
Identities = 510/517 (98%), Gaps = 2/517 (0%)
Strand = Plus / Plus
Query: 5 gaattctggagttttcaggttagattttttttctctctctttcatgtgtgtccgtgtgca 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctggagttttcaggttagattttttttctttctctttcatgtgtgtccgtgtgca 264
Query: 65 tgtcgtgcgcgagcatctaggcttcttgccagctcgaggcatgcagtttgtcttcagcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgtcgtgcgcgagcatctaggcttcttgccagctcgaggcatgcagtttgtcttcagcag 324
Query: 125 tagcaccagccaccttgaaacaattcctggaaatttactttctccctccctgcctaacta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagcaccagccaccttgaaacaattcctggaaatttactttctccctccctgcctaacta 384
Query: 185 ca--tttttttttttttaaagtatagacaagacactataatcaacattgcagaggaagga 242
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cattttttttttttttttaagtatagacaagacactataatcaacattgcagaggaagga 444
Query: 243 aggcaggagaggagatatattgagaagcatagataaaggctggcagcttctcagggttgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggcaggagaggagatatattgagaagcatagataaaggctggcagcttctcagggttgg 504
Query: 303 ccttggccctgcagaaatgctgaaacaagctgttccaggatcccccacaacttgccagcc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccttggccctgcagaaatgctgaaacaagctgttccaggatcccccacaacttgccagcc 564
Query: 363 cttgtggcagaggcaggtgtatagtggaaaggtcaaggccaaagagtttggcaacaaatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttgtggcagaggcaggtgtatagtggaaaggtcaaggccaaagagtttggcaacaaatg 624
Query: 423 gttacactacccagtagttacaagttcgctctctctgagaagctaagggtgacctctaaa 482
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 625 gttacaccacccagtagttacaagttcgctctctctgagaagttaagggtgacctctaaa 684
Query: 483 gatactttgttctcatggtccccaaagaatgctacct 519
||||||||||||||||||||| |||||||||||||||
Sbjct: 685 gatactttgttctcatggtcctcaaagaatgctacct 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 921
Length adjustment: 10
Effective length of query: 509
Effective length of database: 911
Effective search space: 463699
Effective search space used: 463699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_p06.g1 MSMg01no337_p06.g1 CHROMAT_FILE:
MSMg01no337_p06.g1 PHD_FILE: MSMg01no337_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:29 2005
(455 letters)
>mm_chr10_127370357_127371208
Length = 852
Score = 837 bits (433), Expect = 0.0
Identities = 449/455 (98%), Gaps = 3/455 (0%)
Strand = Plus / Minus
Query: 1 acagaaatgctgtgtgggtgtcaaagcctgtgattcaggacttggaagttggaaacaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 acagaaatgctgtgtgggtgtcaaagcctgtgattcaggacttggaagttggaaacaagg 702
Query: 61 gatccctggggcaagatagcaagctataccagctggtgtcagcgaactctgatccaagat 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 701 gatccctggggcaagatagcaagctatactagctggtgtcagcgaactctgatccaagat 642
Query: 121 gtcaccctcaggtctccacaagcctgtcacacacacacacactacacatgaatatcgata 180
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 641 gtcaccctcaggtctccacaagcctgt--cacacacacacactacacatgaatatcgata 584
Query: 181 caccacatggacgaatgcacacaacacggaaaaaatgaaaataaataaaaacctctaaat 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 caccacatggatgaatgcacacaacacggaaaaaatgaaaataaataaaaacctctaaat 524
Query: 241 tcccatctgctgtgaaagctgaactgtagttaaatctttccttccgccaaagtcttcact 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tcccatctgc-gtgaaagctgaactgtagttaaatctttccttccgccaaagtcttcact 465
Query: 301 tagagaggccaagcttttccatcaaggcccccattggcatacagaaggccaaacagtacg 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 464 tagagaggccaagcttttccatcaaggcccccattggcatacggaaggccaaacagtacg 405
Query: 361 aaacctaaccggcaacatccaattcatgcctcatcagggcaatatttaaacactgtctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aaacctaaccggcaacatccaattcatgcctcatcagggcaatatttaaacactgtctta 345
Query: 421 atttttctgccgctttccaattgtataatggcagc 455
|||||||||||||||||||||||||||||||||||
Sbjct: 344 atttttctgccgctttccaattgtataatggcagc 310
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 852
Length adjustment: 10
Effective length of query: 445
Effective length of database: 842
Effective search space: 374690
Effective search space used: 374690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
