TCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTGTTAACTTTATACCCTAATTGAACTGATTTGTTTGTTGATGTC
TGGCTTTTTGAGCTCTTTACGTATTTTGGATATTAGTCATCTATAAGATG
TGGAATTGGTGAAAATCCTTTTTCATTCTGCAGGGTGCCATTTAATAGGA
TATATATTTTTATCATGTTCATTCCCTCTCCTTCCAGATTTAATCATAAA
TACATATAACAATTGATAAGTATTTTGTTTTCTTTTACTGAAAATGTTTT
ATACAATGTATTTTGATTGTCATTTTCTCTTCCCTTACTCTTCTCAGATC
TTGCAACTCTCCATTCTATCATTATCAATACATTTTCTGAGAAAAAAACA
ACAACAAACAAACAGGCATCTAAGGAATAATTAAACTAAACTAAACTAAA
CTAAACTACAATAAAATAAAATAAAATAAAATAAAATAATACAAAAAAAG
AAATACAAATCAGCATGGGATACCATGAAACAAGGGCCAAACAGGGGAGA
AGGGCAATAAACACTTACAGACTCATGGTAGACCACTAAAACATTCGCAT
CATGGATTATCAGTGTTGTCTCTGATACTAGGAGAATTTTTTTTCAATCA
GCATTATTTATAGCTGAATTGGAGAGCCGGCTACCGATACCATAATGCTT
GTTAGAGAAGCTCGCCCCTATAATTCTATTCT

NCCGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGCACCCCATTTT
TTTAGTAAGGTTATTTGGTTCTCTGGAGTCTAAGTTCTTGAGTTCTTTGT
ATATATTTGATTAGCCCTCTATCAGATGTAGGGTTGGTAAAGATCTTTTC
CTAATCTGTTCATTGCCATTTTGTCCTATTGACAGTGGCCTTTGCCTTAC
AGAAGCTTTGCAATTTTTTCCATGGGGAAAGGGTTTATTGGAGGGGCAGG
GAGGACAAAGTGGGGTGACGAAGAAGAAGAAGGAAAGAAAGTGAAGCTTT
GCAATTTTATGAGGTCCCATTCATCAATTCTTTATCATACAGCATAAGCT
ATTCGTGTTCTGTTTAGGAAAATTTTCCCCTGTGCCCATGTGCTCCAGAC
TCTTCCCCACATTCTTTTCTATCAGTTTCGCTGTGTCTGCTTTTATGCGG
TGGTCCTTGATTCACTTGGACTGGAACTTGGTACAAGGAGATAATAATGG
ATTGATTTGCATTCTTTTAAATGTTAACCACCAGTTTAACCAGCAGCATT
TGTTGAAAATGCTTTTGTTTTTGTTTGTTTGGTTTTGTTTTTGTTTTCTC
CACTGGATGGTTTTAGCTCCTTTGCAAAAGAATCAATGACTTTAGGTGTG
TGGGTTTCTTTTTGGGTTTTTACATCTATTCCCTTGATTTTTCTGCG

Query= MSMg01no339_k09.b1 MSMg01no339_k09.b1 CHROMAT_FILE:
MSMg01no339_k09.b1 PHD_FILE: MSMg01no339_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:32 2005
         (630 letters)



>mm_chr10_33079357_33080388
          Length = 1032

 Score =  930 bits (481), Expect = 0.0
 Identities = 561/607 (92%), Gaps = 38/607 (6%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgttaac-tttatacccta------attgaactgatttgtttgttgatgtct 57
           ||||||||||||||  |||||||||||      |||||||||||||||||||||||||||
Sbjct: 225 gaattctctgttaaaatttataccctatttttaattgaactgatttgtttgttgatgtct 284

                                                                       
Query: 58  ggctttttgagctctttacgtattttggatattagtcatctataagatgtggaattggtg 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggctttttgagctctttacgtattttggatattagtcatctataagatgtggaattggtg 344

                                                                       
Query: 118 aaaatcctttttcattctgcagggtgccatttaataggatatatatttttatcatgttca 177
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aaaatcctttttcattctgcacggtgccatttaataggatatatatttttatcatgttca 404

                                                                       
Query: 178 ttccctctccttccagatttaatcataaatacatataacaattgataagtattttgtttt 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttccctctccttccagatttaatcataaatacatataacaattgataagtattttgtttt 464

                                                                       
Query: 238 cttttactgaaaatgttttatacaatgtattttgattgtcattttctcttcccttactct 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cttttactgaaaatgttttatacaatgtattttgattgtcattttctcttcccttactct 524

                                                                       
Query: 298 tctcagatcttgcaactctccattctatcattatcaatacattttctgagaaaaaaacaa 357
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   
Sbjct: 525 tctcagatcttgcaactctctattctatcattatcaatacattttctgagaaaaaaa--- 581

                                                                       
Query: 358 caacaaacaaacaggcatctaaggaataattaaactaaactaaactaaactaaactacaa 417
                    ||||| ||||||||||||||||||||||||||||||||          |||
Sbjct: 582 ---------aacagacatctaaggaataattaaactaaactaaacta----------caa 622

                                                                       
Query: 418 taaaataaaataaaataaaataaaataatacaaaaaaagaaatacaaatcagcatgggat 477
           |||||||||||||| ||||||||||||   ||||||| |||| ||||||||| |||||||
Sbjct: 623 taaaataaaataaa-taaaataaaata---caaaaaa-gaaaaacaaatcaggatgggat 677

                                                                       
Query: 478 a---ccatgaaacaagggccaaacaggggagaagggcaataaacacttacagactcatgg 534
           |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaaaccatgaaacaagggccaaacaggggagaagggcaataaacacttacagactcatgg 737

                                                                       
Query: 535 tagaccactaaaacattcgcatcatggattatcagtgttgtctctgatactaggagaatt 594
           ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 738 tagaccactgaaccattcgcatcatggattatcagtgttgtctctgatactaggaga-tt 796

                  
Query: 595 ttttttc 601
           |||||||
Sbjct: 797 ttttttc 803


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1032
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1022
Effective search space:   633640
Effective search space used:   633640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)