Query= MSMg01no340_a06.b1 MSMg01no340_a06.b1 CHROMAT_FILE:
MSMg01no340_a06.b1 PHD_FILE: MSMg01no340_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:58 2005
(562 letters)
>mm_chr10_6122307_6123268
Length = 962
Score = 1048 bits (542), Expect = 0.0
Identities = 554/558 (99%)
Strand = Plus / Plus
Query: 5 gaattctcagctctgcctgcacaatgcctgcctggaagctgccatgctcctgccttgatg 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattctcagctctgcctgcacaatgcctgcctggacgctgccatgctcctgccttgatg 264
Query: 65 ataatggactcaacctctgaacctgtaagccaacccctattaaatgttgtcatttataag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataatggactcaacctctgaacctgtaagccaacccctattaaatgttgtcatttataag 324
Query: 125 agttgccttggtcatagtgtctgttcacagcagtaaacccaaactaagacactgagagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agttgccttggtcatagtgtctgttcacagcagtaaacccaaactaagacactgagagaa 384
Query: 185 ttgagcctaaaaacgaggccaactaaggtctcatgtaatagccctctttattcagagcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgagcctaaaaacgaggccaactaaggtctcatgtaatagccctctttattcagagcat 444
Query: 245 ataataatttatgctctgatggttaagagagagtcatatgaataaagtatacaatcacaa 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgataatttatgctctgatggttaagagagagtcatatgaataaagtatacaatcacaa 504
Query: 305 gggtaagcagcatgtgacagatgaaagccacatacagcgaaaacatgttttctgtagagg 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gggtaagcagcatgtgacagacgaaagccacatacagcgaaaacatgttttctgtagagg 564
Query: 365 tttataaacaaataacaatagccagttataataaatatatgaagtgaactccctcctatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttataaacaaataacaatagccagttataataaatatatgaagtgaactccctcctatc 624
Query: 425 agctatacctgagaggggcatggaagcacactctaagaatgactttgtgatctgaagaaa 484
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 625 agctatacctgagaggggcatggaagcacactctaagaatgactttgttatctgaagaaa 684
Query: 485 cggggttcccaagactcttgccttgttttcttgtcattctctcacaagcattcagaattc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cggggttcccaagactcttgccttgttttcttgtcattctctcacaagcattcagaattc 744
Query: 545 tcctcccataatgccatt 562
||||||||||||||||||
Sbjct: 745 tcctcccataatgccatt 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_a06.g1 MSMg01no340_a06.g1 CHROMAT_FILE:
MSMg01no340_a06.g1 PHD_FILE: MSMg01no340_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:58 2005
(498 letters)
>mm_chr10_6295117_6296014
Length = 898
Score = 901 bits (466), Expect = 0.0
Identities = 490/498 (98%)
Strand = Plus / Minus
Query: 1 tatagtgagagcctgtctcaaaagaatcacagttgggaggtagctcagtgctacagtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 698 tatagtgagagcctgtctcaaaagaatcacagttgggaggtagctcagtactacagtgct 639
Query: 61 tgccttggtctagcaaaacaagtagtaaggaagcaaatagacattactgaacctttaagc 120
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 638 tgccttggtctagcaaaacaactagtaaggaagcaaatagacactactgaacctttaagc 579
Query: 121 catcttcctctctgtgagtctaatttcatttgtcctaagcaatgcttactacattcacat 180
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 578 catcctcctctctgtgagtctaatttcatttgtcctaagcaatgcttagtacatttacat 519
Query: 181 cgtgtctaattttcatttatggtattgaccgttttaagattatttggacagaaaatgtat 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 518 cgtgtctaattttcatttatggtattgaccgttttaagattatttagacagaaaatgtat 459
Query: 241 ttttaagaacaaagcatagaatttggttaagatgttctcatgcgtgaactctgtgagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttttaagaacaaagcatagaatttggttaagatgttctcatgcgtgaactctgtgagttc 399
Query: 301 cttgattcttagatacacatttgggaagggcttctagaatcagtgacataggagcctgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 cttgattcttagatacacatttgggaagggcttctagaatcagtgacataggagcctgta 339
Query: 361 tccatggacagcctaagcatctcatttgtgggcagtgtcttgttttggacacccccttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tccatggacagcctaagcatctcatttgtgggcagtgtcttgttttggacacccccttgc 279
Query: 421 tagtgtcataggagagcgttgggtaccccctgcctcactacaggtggccatgatgccagc 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tagtgtcataggagagtgttgggtaccccctgcctcactacaggtggccatgatgccagc 219
Query: 481 agttttcagtctgaagac 498
||||||||||||||||||
Sbjct: 218 agttttcagtctgaagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|