Query= MSMg01no340_e01.b1 MSMg01no340_e01.b1 CHROMAT_FILE:
MSMg01no340_e01.b1 PHD_FILE: MSMg01no340_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:14 2005
(119 letters)
>mm_chr10_104628303_104628821
Length = 519
Score = 221 bits (114), Expect = 2e-62
Identities = 117/118 (99%)
Strand = Plus / Plus
Query: 1 atctgccattaattgtccttcactctacacagaaaccaaagataatgtcaaaccattcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgccattaattgtccttcactctacacagaaaccaaagataatgtcaaaccattcta 260
Query: 61 tgatttagtatttttaaaatgcatgcattttttttagctgaattcaattgatcctact 118
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgatttggtatttttaaaatgcatgcattttttttagctgaattcaattgatcctact 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no340_e01.g1 MSMg01no340_e01.g1 CHROMAT_FILE:
MSMg01no340_e01.g1 PHD_FILE: MSMg01no340_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:14 2005
(542 letters)
>mm_chr10_104794960_104795901
Length = 942
Score = 1017 bits (526), Expect = 0.0
Identities = 542/556 (97%), Gaps = 14/556 (2%)
Strand = Plus / Minus
Query: 1 tttgtttagctctgtactccatttttaatagggttatttggttctctggagtctactttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tttgtttagctctgtactccatttttaatagggttatttggttctctggagtctactttc 533
Query: 61 ttgaattccttatatatcttggataatagccctctatcagatgtagggtttgtaaagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ttgaattccttatatatcttggataatagccctctatcagatgtagggtttgtaaagatc 473
Query: 121 ttttcccaatctgttggttgctgtttcattttcaaggattctgcacaaaagatattcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttttcccaatctgttggttgctgtttcattttcaaggattctgcacaaaagatattcttt 413
Query: 181 ggatgttaaactagataatctattaaggagtcatctaggatacaaattagatttgaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggatgttaaactagataatctattaaggagtcatctaggatacaaattagatttgaaaat 353
Query: 241 tgtgag--------------gtgtgtgtgtgtgtgtgtgtttaaatgatagtagtgattt 286
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgtgaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttaaatgatagtagtgattt 293
Query: 287 tggaatatttaatattcaagaaaaagaaaaggttaataaatggatatgttatggattctg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tggaatatttaatattcaagaaaaagaaaaggttaataaatggatatgttatggattctg 233
Query: 347 tcatgtgtttattagttatttcctccttgcagagataatatatccgagaaaatcagctaa 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tcatgtgtttattagttatttcctccttgcagagataatatatccgagaaaatcagctaa 173
Query: 407 agaaaggaagggttgggttttgctcttagtgtgaggctaaagttatccatccttgctgtg 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 agaaaggaagggttgggttttgctcttagtgtgaggctaaagttatccatccttgctgtg 113
Query: 467 tagaaggcttgaggccacattgcaccaaagtctggatgcagagagaggtgaacactgatg 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tagaaggcttgaggccacattgcaccaaagtctggatgcagagagaggtgaacactgatg 53
Query: 527 ctcatgtttttatttg 542
||||||||||||||||
Sbjct: 52 ctcatgtttttatttg 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
