Query= MSMg01no340_g08.b1 MSMg01no340_g08.b1 CHROMAT_FILE:
MSMg01no340_g08.b1 PHD_FILE: MSMg01no340_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:24 2005
(645 letters)
>mm_chr10_103162195_103163239
Length = 1045
Score = 1210 bits (626), Expect = 0.0
Identities = 638/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcttcatatcaagaaagtcgagggtcaaaggcttagggcagaaacttctataa 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttcttcagattaagaaagtcgagggtcaaaggcttagggcagaaacttctataa 263
Query: 65 ttattttactgaacattcaaaactgtcaaattgctgtctaaatatttatgtttatatttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttattttactgaacattcaaaactgtcaaattgctgtctaaatatttatgtttatatttg 323
Query: 125 tgatataggatgctcacattcttgtcagaaaaaaaaa-tctttttaccgtggttatcagt 183
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 324 tgatatagtatgctcacattcttgtcagaaaaaaaaaatctttttaccgtggttatcagt 383
Query: 184 caaatggagagacgaacaagaagctgaatgctcatcactatacaggtcatctatatcagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caaatggagagacgaacaagaagctgaatgctcatcactatacaggtcatctatatcagc 443
Query: 244 ctacccccatctactcaccaggtctagggaacataattgaaggggggaatagaaaagaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctacccccatctactcaccaggtctagggaacataattgaaggggggaatagaaaagaca 503
Query: 304 aaggaaaattagaggaataatacaatgttgtcttctgtacctaacatgactaagagagtc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggaaaattagaggaataatacaatgttgtcttctgtacctaacatgactaagagagtc 563
Query: 364 ctgaactcacagaaactgcagttactttcatttagttctatcttggctaatagtccctgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgaactcacagaaactgcagttactttcatttagttctatcttggctaatagtccctgt 623
Query: 424 tgcaaacataattattatgacttgggattgtgtaagcatgcttgaattcattatcatgtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgcaaacataattattatgacttgggattgtgtaagcatgcttgaattcattatcatgtt 683
Query: 484 gggttttcattactgaccattgctttttacataaacatttttggttctttgaactagttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gggttttcattactgaccattgctttttacataaacatttttggttctttgaactagttt 743
Query: 544 ccattggttaatctgaaaagttcttttgtcaaggttctatgatttgtgccatctgaattt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccattggttaatctgaaaagttcttttgtcaaggttctatgatttgtgccatctgaattt 803
Query: 604 gtcttgagctaatttaaaaaatatgttaccattttaaaggag 645
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtcttgagctaatttaaaaaatatgttaccattttaaaggag 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_g08.g1 MSMg01no340_g08.g1 CHROMAT_FILE:
MSMg01no340_g08.g1 PHD_FILE: MSMg01no340_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:24 2005
(615 letters)
>mm_chr10_103285446_103286460
Length = 1015
Score = 737 bits (381), Expect = 0.0
Identities = 395/400 (98%)
Strand = Plus / Minus
Query: 214 tgtactttctctggctcctttattggggaccctgtgcttcctccaatggatggctgtgaa 273
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 1015 tgtactttctctggctcctttattgaggaacctgtgcttcctccaatggatggctgtgaa 956
Query: 274 tatccacttctgtatttgcactggtagagtctctcaggagacagctatgtcaggctctta 333
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 955 tatccacttctgtatttgcactggtagagtctctcaggagatagctatgtcaggctctta 896
Query: 334 tcagcaagctcttgttgacatccacaatagtatacgggtagctgtatatgggctggttcc 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tcagcaagctcttgttgacatccacaatagtatacgggtagctgtatatgggctggttcc 836
Query: 394 ccaggtgtggcagtctctgaatattcttgttcgatcttaaggggtcatagctgtaatgaa 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ccaggtgtggcagtctctgaatattcttgttcgatcttaaggggtcatagctgtaatgaa 776
Query: 454 ctactgtttggcagtgtctcaagcatctcaagcatctatagtcctganagacttcctgtg 513
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 775 ctactgtttggcagtgtctcaagcatctcaagcatctatagtcctgaaagacttcctgtg 716
Query: 514 ctcacgtagtttaatgaaaaatcctatcttcctgttgaggcatacaattttgtttaagct 573
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ctcatgtagtttaatgaaaaatcctatcttcctgttgaggcatacaattttgtttaagct 656
Query: 574 gactcaatacaatcagccttatacctattaataccccttg 613
||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gactcaatacaatcagccttatacctattaataccccttg 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
