Query= MSMg01no340_p07.b1 MSMg01no340_p07.b1 CHROMAT_FILE:
MSMg01no340_p07.b1 PHD_FILE: MSMg01no340_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:04 2005
(624 letters)
>mm_chr10_108159233_108160256
Length = 1024
Score = 1147 bits (593), Expect = 0.0
Identities = 614/621 (98%)
Strand = Plus / Plus
Query: 4 ggaattcacactagccacacagtggattgtggcaagttgttttagaaaactgaaaattag 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacactagccagacagtggattgtggcaagttgttttagaaaactgaaaattag 263
Query: 64 accatgagagaatagagttataggatattcattcacaaggattaataccatgaacatgaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 accatgagagaatagagttataggatattcattcacaaggattaataccatgaacatgaa 323
Query: 124 aagaactcagtagaaagtgtcaaatagagtcagctaaaatgtgcaaattatcttgagcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagaactcagtagaaagtgtcaaatagagtcagctaaaatgtgcaaattatcttgagcca 383
Query: 184 tttcgtagaatagaattatagaaaaaaatgtacaaaatagatacccattgagaaaatgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttcgtagaatagaattatagaaaaaaatgtacaaaatagatacccattgagaaaatgta 443
Query: 244 aatcaaaaccacaatgagatatcatatccttctcagtcagggcgggtgttatcaaaaagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatcaaaaccacaatgagatatcatatccttctcagtcagggcgggtgttatcaaaaagg 503
Query: 304 cagaaagtaggagctggggagagctgggccgttcagtgaagcttcctaaccaagaggact 363
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 504 cagaaagtaggagctggggagagctgggccattcagcgaagcttcctaaccaagaggact 563
Query: 364 tgagtttgtatttctaacaaccatataagaatttgggtgaggtggaacacagcttcagcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgagtttgtatttctaacaaccatataagaatttgggtgaggtggaacacagcttcagcc 623
Query: 424 ccaacgctattcaagtggggaagagctgcagccctatggagctttttggccattcagggt 483
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 624 ccaacgcaattcaagtggggaagagctgcagccctatggagctctttggccattcagggt 683
Query: 484 agccaagtctgtaagttctaggttcagtgagagaccctgccttcaaatgtaagtgataga 543
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 684 agccaagtctgtaagttctaggttcagtgagagaccctgcctttaaatgtaagtgataga 743
Query: 544 tcaagcaagaaatccatgtgacatatacacatgcgccacacagccacatatcatcaacaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcaagcaagaaatccatgtgacatatacacatgcgccacacagccacatatcatcaacaa 803
Query: 604 ggctgccaccgccgtcaccac 624
||||||||| |||||||||||
Sbjct: 804 ggctgccactgccgtcaccac 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_p07.g1 MSMg01no340_p07.g1 CHROMAT_FILE:
MSMg01no340_p07.g1 PHD_FILE: MSMg01no340_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:04 2005
(569 letters)
>mm_chr10_108358690_108359658
Length = 969
Score = 1019 bits (527), Expect = 0.0
Identities = 557/569 (97%), Gaps = 4/569 (0%)
Strand = Plus / Minus
Query: 1 tctaagctagcctggatgtcctatgtgtttgttttcttttacttaacaaggcagtatgga 60
|||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 933 tctaagctagcccggatgtcctatg----tgttttcttttacttaacaaggcagtatgga 878
Query: 61 gagagacagagacagagacagagacagagacagagacagagacagagacagagacagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 gagagacagagacagagacagagacagagacagagacagagacagagacagagacagaga 818
Query: 121 cagagagaggcaaacagagagacagagactgagagacagagacagagagaaagaagggga 180
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 817 cagagagaggcaaacagagagacagaaactgagagacagagacagagagaaagaaggggg 758
Query: 181 gagggagagaggaaggacagaacaagagatatcttaatcttaaaggtactttcaaatatt 240
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 757 gagggagagaggaaggacaggacaagagatatcttaatcttaaaggtattttcaaatatt 698
Query: 241 cagcaagtaagtattggaccctataaaatggagtatatccttaagagtatgtgaaactac 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cagcaagtaagtattggcccctataaaatggagtatatccttaagagtatgtgaaactac 638
Query: 301 atggtggagaagtcatttttaaagactatatctgaatcctagtttatttcccatatttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atggtggagaagtcatttttaaagactatatctgaatcctagtttatttcccatatttta 578
Query: 361 actttcccaaaattcttattttttaaaccattacagagcttcatttggcatcaacagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 actttcccaaaattcttattttttaaaccattacagagcttcatttggcatcaacagctt 518
Query: 421 tggtgattctgtgcacattataatgtttaagagtaaaaaaaaatagtcactagtcaatag 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 517 tggtgattctgtgcacattataatgtttaagagtaaagaaaaatagtcactagtcaatag 458
Query: 481 tcactatttttcatgtcttaccttgtgataacagttatagtcggagataaaggtaccttc 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcactatttttgatgtcttaccttgtgataacagttatagtcggagataaaggtaccttc 398
Query: 541 cctccctttccagacaccatttagtcaaa 569
|||||||||||||||||||||||||||||
Sbjct: 397 cctccctttccagacaccatttagtcaaa 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
