Query= MSMg01no341_a17.b1 MSMg01no341_a17.b1 CHROMAT_FILE:
MSMg01no341_a17.b1 PHD_FILE: MSMg01no341_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:11 2005
(525 letters)
>mm_chr10_106899467_106900391
Length = 925
Score = 872 bits (451), Expect = 0.0
Identities = 503/525 (95%), Gaps = 9/525 (1%)
Strand = Plus / Plus
Query: 4 ggaattcactcatcttgcaacagccatatcttggggtacagaatttagtatttgaataca 63
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattcactcaacttgggacagccatatcttggggtacagaatttagtatttgaataca 266
Query: 64 tagcagcaccagaccaacccccc---aacagatttgatgatggacatatttagtgcctac 120
||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 267 tagcaacaccagaccaacccccccccaacagatttgacgatggacatatttaatgccta- 325
Query: 121 taggattgtcagcagctagcaacatttgtggtaagattgactaaactagtctgaggaaga 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 326 -----ttgtcagcagctagcaacatttgtggtaagattgtctaaactagtctgaggaaga 380
Query: 181 aagggatgtatacgactgaaagaggcaaacattatttactcatgcatgtgcctcaaaatt 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 aagggatgtatacgactgaaagaggcaaacattatttattcatgcatgtgcctcaaaatt 440
Query: 241 tttagtattgtagcagtttaacttactgaattctgcaggttggattggattttctattgg 300
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 441 tttagtattgtagcagtttaacttgctgaattctgcaggttggatgggattttctattgg 500
Query: 301 ctcatgtgtgccctgtgtgaagactgttttcagctattcgcttgccagggttcagctggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcatgtgtgccctgtgtgaagactgttttcagctattcgcttgccagggttcagctggg 560
Query: 361 cttctgaagttgcactgttttctctttatagtctttcatactcagcaaaccctgattaaa 420
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 ctgctgaagttgcactgttttctcttcatagtctttcatactcagcaaaccctgattaaa 620
Query: 421 tatctttccagcacaatagcctcaggggttccaagtaggaaaacatgacaggtgttagac 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 tatctttccagcacaatagcctcaggggttccaagtaggaaaacatgacaagtgttagac 680
Query: 481 ctttgagtcccagatacagaaactcacagcacattgtcttgagca 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttgagtcccagatacagaaactcacagcacattgtcttgagca 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_a17.g1 MSMg01no341_a17.g1 CHROMAT_FILE:
MSMg01no341_a17.g1 PHD_FILE: MSMg01no341_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:11 2005
(480 letters)
>mm_chr10_107021638_107022517
Length = 880
Score = 913 bits (472), Expect = 0.0
Identities = 478/480 (99%)
Strand = Plus / Minus
Query: 1 cttgccttatccagctttaagcctaatccacaatttacagaaacacattctacaaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cttgccttatccagctttaagcctaatccacaatttacagaaacacattctacaaataaa 621
Query: 61 aggataaagttcttaagtaatgtaaatgtgtaaaagcaagtggaaaaaatgtttaaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggataaagttcttaagtaatgtaaatgtgtaaaagcaagtggaaaaaatgtttaaccca 561
Query: 121 aactaagctttattttacttataaaactttctacttaacatggggtgttttgcaaaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aactaagctttattttacttataaaactttctacttaacatggggtgttttgcaaaatgc 501
Query: 181 tgtaattgtctgcttgtcatatatatatataaactcacaattatatatccaaatttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtaattgtctgcttgtcatatatatatataaactcacaattatatatccaaatttaaga 441
Query: 241 ggtgctctgagattctatctgccaagaagggtgaagttaacaaagcttgagagtctgcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtgctctgagattctatctgccaagaagggtgaagttaacaaagcttgagagtctgcac 381
Query: 301 catgaggccgcatctcaagttttcctcactgaaaattttgattgaaaagggaactttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catgaggccgcatctcaagttttcctcactgaaaattttgattgaaaagggaactttccc 321
Query: 361 atatcattctgatcacaagaatgtacaaattcatttcacggtgtgatgtaaagaacagta 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 320 atatcattctgatcacaagaatgtacaaattcatttcatggtgtgatgtaaagaacagta 261
Query: 421 actctacgccctccaaatgatgttttctcatagatcattttattttataatttgctacaa 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 actctatgccctccaaatgatgttttctcatagatcattttattttataatttgctacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
