Query= MSMg01no341_i19.b1 MSMg01no341_i19.b1 CHROMAT_FILE:
MSMg01no341_i19.b1 PHD_FILE: MSMg01no341_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:50 2005
(431 letters)
>mm_chr10_93843015_93843847
Length = 833
Score = 683 bits (353), Expect = 0.0
Identities = 402/429 (93%), Gaps = 20/429 (4%)
Strand = Plus / Plus
Query: 7 gaattcttgggc--ttccggaagggctggaggctgggaagaagtatggcccaagggtgga 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gaattcttgggcagt--gggaagggctggaggctgggaagaagtatggcccaagggtgga 278
Query: 65 ctttattctctctctctctctctctctctctctctctctcatctcagggcaagga--ttt 122
|||||| ||||||||||||||||||| ||||||||||||||| |||
Sbjct: 279 ctttat--------------tctctctctctctctctctgatctcagggcaaggattttt 324
Query: 123 ttttccttttgaccttaaaaaaagatgggtacatattatggacatcctttggattctttg 182
||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||
Sbjct: 325 ttttccttttgaccttaaagaaagatggatacatattatagacatcctttggattctttg 384
Query: 183 gaaggtttaacaaggaaaatatacagaaaataagccaaaacaatgtatcaaactttatcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaggtttaacaaggaaaatatacagaaaataagccaaaacaatgtatcaaactttatcc 444
Query: 243 ttattatgcatgtgtgctttggaggtgattcattgttgactgtgccgaggaaggtagcca 302
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 ttattatgcatgtgtgctttggaggtgattcattgctgactgtgccgaggaaggtagcca 504
Query: 303 gactctccagctttgaagtgaagtgccagggaggtgattttctgcttggcagctttaact 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gactctccagctttgaagtgaagtgccagggaggtgattttctgcttggcagctttaact 564
Query: 363 ctttaatatgctggttgtgacaagtggctgcctggttctctgcctgctgctagaattgac 422
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctttaatacgctggttgtgacaagtggctgcctggttctctgcctgctgctagaattgac 624
Query: 423 actgctctg 431
|||||||||
Sbjct: 625 actgctctg 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 833
Length adjustment: 9
Effective length of query: 422
Effective length of database: 824
Effective search space: 347728
Effective search space used: 347728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_i19.g1 MSMg01no341_i19.g1 CHROMAT_FILE:
MSMg01no341_i19.g1 PHD_FILE: MSMg01no341_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:50 2005
(415 letters)
>mm_chr10_93960216_93961030
Length = 815
Score = 688 bits (356), Expect = 0.0
Identities = 400/416 (96%), Gaps = 6/416 (1%)
Strand = Plus / Minus
Query: 1 caggacagccagggctatacagagaaactctgtctcaggggaaaaaaaaaatgaatgtgt 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 457 caggacagccagggctatacagagaaactctgtctcagggg---gaaaaaatgaatgtgt 401
Query: 61 ggatgcatgtatgattgggtgtgagcaaataaaatcctggccacccaacctgattggtga 120
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 400 ggatgcatatatgattgggtgtgagcaaataaaatcctggccacccaacctaattggtga 341
Query: 121 tgggaattccatgagcttctggctctttcctctccaatgcaattatttaagtgacaatat 180
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgggaattccacaagcttctggctctttcctctccaatgcaattatttaagtgacaatat 281
Query: 181 gacatctacttttccgcctgccttacctgaaaaaaacaaacaaacaagcaaacaaacaaa 240
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 280 gacatctacttttccgcctgcctgacctg-aaaaaacaaacaaacaagcaaacaaacaaa 222
Query: 241 caaaatgtcctgagtacagtttacctcctactgtaatgcccatggagacccaaaaaggaa 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 221 caaaatgtcctgagtacagtttacctcccactgtaatgcccatggagacccaaaaaggaa 162
Query: 301 gaagaatcggctggtgatggattcaaagtcaagaccacctgacattagcaagcaaggctc 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 161 gaagaatcggctggtgatggattcaaagtcaagaccatctgacattagcaagcaaggctc 102
Query: 361 tctactgggtaatgttccccaggcaaaaa-taggaatgcctacaaaaaaagtacag 415
|||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 101 tctattgggtaatgtttcccaggcaaaaaataggaatgcctacaaaaaa-gtacag 47
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
