Query= MSMg01no342_e17.b1 MSMg01no342_e17.b1 CHROMAT_FILE:
MSMg01no342_e17.b1 PHD_FILE: MSMg01no342_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:46 2005
(242 letters)
>mm_chr10_70727722_70728364
Length = 643
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 atattgatattttgtctt-aaaaaaaaaaggtttggatacattaatgtttttagaagact 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atattgatattttgtcttaaaaaaaaaaaggtttggatacattaatgtttttagaagact 384
Query: 60 ccacaagtcgttttagaagtgtttcctaaatcccaaattagaaaaaccaatagaaggcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccacaagtcgttttagaagtgtttcctaaatcccaaattagaaaaaccaatagaaggcag 324
Query: 120 tccccgcaattggctgtaactgagaacagctcctctcccacttttccacactgttgaatc 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 323 tccccgcaattggctgtaactgagaacagctcctctcccacttttccacactgttgaaac 264
Query: 180 tcttgtctcctactccaagagaattggcaagaactccttccatcttgtctcaacatttat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcttgtctcctactccaagagaattggcaagaactccttccatcttgtctcaacatttat 204
Query: 240 tgc 242
|||
Sbjct: 203 tgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no342_e17.g1 MSMg01no342_e17.g1 CHROMAT_FILE:
MSMg01no342_e17.g1 PHD_FILE: MSMg01no342_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:46 2005
(340 letters)
>mm_chr10_70552015_70552752
Length = 738
Score = 623 bits (322), Expect = 0.0
Identities = 335/340 (98%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 1 tcagctcctcctgtaccatgccttcctggacattgttatgctcctgccttgatgataatg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagctcctcctgtaccatgcctccctggacattgttatgctcctgccttgatgataatg 260
Query: 61 gactgaacctctgaacctgtaagtcaaccccaattaaatgttgtccttataagagttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactgaacctctgaacctgtaagtcaaccccaattaaatgttgtccttataagagttgcc 320
Query: 121 ttggtcatggtgtctgttcacagcagtaaatccctaagacaatatggaaacagtccagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggtcatggtgtctgttcacagcagtaaatccctaagacaatatggaaacagtccagtt 380
Query: 181 ctaccggagtgtgtgtgtgtgtgttttcccaaaaagaaaagaaaacatacacacattgtt 240
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaccggagtgtgtgtgtgtgt--tttcccaaaaagaaaagaaaacatacacacattgtt 438
Query: 241 aaatgtcaatccaagagtctacaaccaactgtatgttcctatgaaaatacataaaatatt 300
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 439 aaatgtcaatccaagagtctacaaccaactgtacgttcctatgaaactacataaaatatt 498
Query: 301 aactatttttaaaatcagatagaataggcatccttcagaa 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aactatttttaaaatcagatagaataggcatccttcagaa 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 738
Length adjustment: 9
Effective length of query: 331
Effective length of database: 729
Effective search space: 241299
Effective search space used: 241299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
