Query= MSMg01no343_b19.b1 MSMg01no343_b19.b1 CHROMAT_FILE:
MSMg01no343_b19.b1 PHD_FILE: MSMg01no343_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:49 2005
(444 letters)
>mm_chr10_82627065_82627908
Length = 844
Score = 812 bits (420), Expect = 0.0
Identities = 435/440 (98%)
Strand = Plus / Plus
Query: 5 gaattccagtctccagctccagctccactgttaattcacccctttgagcctctggcttct 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattccagtctccagctccagctccactgttaactcacccctttgagcctctggcttct 264
Query: 65 tgtctctaaaatggacataaccaccatgcaggatatgggaagactaaggattaataatca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catctctaaaatggacataaccaccatgcaggatatgggaagactaaggattaataatca 324
Query: 125 tgtaatgggctcatgcatgctgggtgcttagtacacaagtgctgtcccttgctggcccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtaatgggctcatgcatgctgggtgcttagtacacaagtgctgtcccttgctggcccca 384
Query: 185 gcagcagcatttgttgaacactatctccgtgttaggcaggaaagataacagtaccctaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagcagcatttgttgaacactatctccgtgttaggcaggaaagataacagtaccctaga 444
Query: 245 caaagagagaatcgataaaccgacaaacaagtacctaggtagtaagtttgtttaggtcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaagagagaatcgataaaccgacaaacaagtacctaggtagtaagtttgtttaggtcag 504
Query: 305 gaaaggaggggtcattgagtagctgaaaacctgggagcagggtctaatggcagagaaaga 364
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 gaaaggaggggtcattgagtagctgaaaacctgggagcagggtctgatggcagagaaaga 564
Query: 365 ggcagccacatggacaccaggaagtgtgcattttgcaccaccgtgacgctggggcctcct 424
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 565 ggcagccacatggacaccaggaagtgtgcattttgcaccactgtgacgctggggcctcct 624
Query: 425 ttcattgtcctgccatcttt 444
||||||||||||||||||||
Sbjct: 625 ttcattgtcctgccatcttt 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_b19.g1 MSMg01no343_b19.g1 CHROMAT_FILE:
MSMg01no343_b19.g1 PHD_FILE: MSMg01no343_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:49 2005
(249 letters)
>mm_chr10_82779033_82779681
Length = 649
Score = 443 bits (229), Expect = e-129
Identities = 245/251 (97%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1 ctctcttaaacgtctggattttttttctttt--ttttttttttttaaccagtggaaactt 58
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 493 ctctcttaaacgtctgga-tttttttctttttcttttttttttttaaccagtggaaactt 435
Query: 59 tttctacctagtggtcaatggcttaatgtgaacaagcgttgctgtggctttggttccact 118
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 434 tttctacctagtggtcaatggcttaatttgaacaagcgttgctgtggctttggttccgct 375
Query: 119 gtacttttggaagcttgggtctgaaggatacaggtctttttgtgatgacaatatgaccca 178
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtgcttttggaagcttgggtctgaaggatacaggtctttttgtgatgacaatatgaccca 315
Query: 179 cagtaaaggaagacctgtcacttacaagacaagtgccagtccggagagtggaggaggttt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cagtaaaggaagacctgtcacttacaagacaagtgccagtccggagagtggaggaggttt 255
Query: 239 tgtagattgga 249
|||||||||||
Sbjct: 254 tgtagattgga 244
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
