Query= MSMg01no343_e23.b1 MSMg01no343_e23.b1 CHROMAT_FILE:
MSMg01no343_e23.b1 PHD_FILE: MSMg01no343_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:06 2005
(449 letters)
>mm_chr10_9027889_9028737
Length = 849
Score = 793 bits (410), Expect = 0.0
Identities = 437/446 (97%)
Strand = Plus / Plus
Query: 4 acagatgacagctacatggaaaaggagccaacccctcgtatcagctttcccaaagtgctt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 acagatgacagctacacggaaaaggagccaacccctcgtatcagctttcccaaagtgctt 263
Query: 64 gtggatcctttgtctgctcacaggttaaggtgggctctgagaagaaaaagcttcccacgg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 264 gtggatcctttgtctgctcacaggttaaggtgggctctgagaagaaaaagcttcccacag 323
Query: 124 tcaaaaataagccaggaaatatgaggttaaatcatgtgaagactgcgttattgctgtgtt 183
||||||||||| ||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 324 tcaaaaataagtcaggaaatatgaggttaaatcttgtgaagactgtgtcattgctgtgtt 383
Query: 184 ctgctcagagtgcaggaatctgcaaatgagctttgtggttctcgatgagaaggagggaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgctcagagtgcaggaatctgcaaatgagctttgtggttctcgatgagaaggagggaca 443
Query: 244 gtagaaaattctgcaaaactatgttgaggtctatacagtctcagagtttgctcatgcaca 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 444 gtagaaaattctgcaaaactatgttgaggtctatacagtctcagagcttgctcatgcaca 503
Query: 304 ttatatcttagggatgggttagagcccacctaatttttgtaaaatatttttgatacatag 363
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 504 ttatatcttagggatgggttagagtccacctaatttttgtaaaatatttttgatacatag 563
Query: 364 gtattcatttatgaatatgtgtgtgtatgtgcatgtgtgtggagataaaaggacagattt 423
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 564 gtattcatttatgaatatgtgtgtgtatgtgcatatgtgtggagataaaaggacagattt 623
Query: 424 gggtgccaatcctcagtagttcttgc 449
||||||||||||||||||||||||||
Sbjct: 624 gggtgccaatcctcagtagttcttgc 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_e23.g1 MSMg01no343_e23.g1 CHROMAT_FILE:
MSMg01no343_e23.g1 PHD_FILE: MSMg01no343_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:06 2005
(378 letters)
>mm_chr10_9186755_9187532
Length = 778
Score = 669 bits (346), Expect = 0.0
Identities = 370/380 (97%), Gaps = 6/380 (1%)
Strand = Plus / Minus
Query: 5 tcctttctagttgcctccctcagattttcaaatttcaaatttgtt----aaaaaaaattg 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 778 tcctttctagttgcctccctcagattttcaaatttcaaatttgttaaaaaaaaaaaattg 719
Query: 61 attccctggacccttttgattccccacactttatatttgattattcagggagaggcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 attccctggacccttttgattccccacactttatatttgattattcagggagaggcagca 659
Query: 121 gcatgtgattaagacctcctagactggtttgtggagacacacacacacacacacacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gcatgtgattaagacctcctagactggtttgtggagacacacacacacacacacacacac 599
Query: 181 acacacacacac-ca-cacgtgcgtccacacccagtgcacccatgtgcgagcacatacac 238
|||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 acacacacacacacaccacatgcgtccacacccagtgcacccatgtgcgagcacatacac 539
Query: 239 aatcatttggtagaccaaggtaaggtcttgtgattttaacttttcagttagctttatgga 298
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agtcatttggtagaccaaggtaaggtcttgtgattttaacttttcagttagctttatgga 479
Query: 299 cttggtcaaattcctctttagtctggaaatacttaagtatttgtgtagtagatcaaaata 358
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 478 cttggtcaaattcctctttagtctggaaatacttaattagttgtgtagtagatcaaaata 419
Query: 359 tgatagagaacagagattag 378
||||||||||||||||||||
Sbjct: 418 tgatagagaacagagattag 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
