Query= MSMg01no343_g01.b1 MSMg01no343_g01.b1 CHROMAT_FILE:
MSMg01no343_g01.b1 PHD_FILE: MSMg01no343_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:11 2005
(249 letters)
>mm_chr10_95170749_95171395
Length = 647
Score = 447 bits (231), Expect = e-130
Identities = 244/249 (97%), Gaps = 2/249 (0%)
Strand = Plus / Minus
Query: 1 caaattctatttctcttaagcctgttctttactgggggctgaaagaaaaggcacttgcca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 caaattctatttctcttaaacctgttctttactgggggctgaaagaaaaggcacttgcca 388
Query: 61 tactcataccactaatttcatactttgtgttttccaacctgaagttgagggccagacagc 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tactcacaccactaatttcatactttgtgttttccaacctgaagttgagggccagacagc 328
Query: 121 cccaaatccctttccctgggatatcatgaattctgagaagactttttgttgtggttcgca 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 327 cccaaatccctttccctgggatatcatgaattctgagaagac--tttgttgtggctcgca 270
Query: 181 gctcccagaccttggtaactggcattccacacataattcctctcaactcctcagggtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gctcccagaccttggtaactggcattccacacataattcctctcaactcctcagggtcaa 210
Query: 241 agagtgtca 249
|||||||||
Sbjct: 209 agagtgtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 647
Length adjustment: 9
Effective length of query: 240
Effective length of database: 638
Effective search space: 153120
Effective search space used: 153120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no343_g01.g1 MSMg01no343_g01.g1 CHROMAT_FILE:
MSMg01no343_g01.g1 PHD_FILE: MSMg01no343_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:11 2005
(336 letters)
>mm_chr10_95033402_95034137
Length = 736
Score = 623 bits (322), Expect = 0.0
Identities = 336/348 (96%), Gaps = 12/348 (3%)
Strand = Plus / Plus
Query: 1 ttcacaatttcaagggagtcttcaaagagattaagaacctatgtcaacaggaacctcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacaatttcaagggagtcttcaaagagattaagaacctatgtcaacaggaacctcact 260
Query: 61 tgtaaaatttaaatgacaacagaactctggatcagactgtcagaattcagagttagttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaaaatttaaatgacaacagaactctggatcagactgtcagaattcagagttagttag 320
Query: 121 aagcagacaaaacttctcaacaataacaggtatgcaggcacacacacacacacacacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcagacaaaacttctcaacaataacaggtatgcaggcacacacacacacacacacaca 380
Query: 181 cacacac------------ccctaataaaagtaccttccaatattaccttttctttccat 228
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacacacacacacacacacccctaataaaagtaccttccaatattaccttttctttccat 440
Query: 229 gttaaaaagagagtcatgttgtgagatcatgtttcctagtaatgtcagaagctacacttg 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttaaaaagagagtcatgttgtgagatcatgtttcctagtaatgtcagaagctacacttg 500
Query: 289 taaaaatctcactaacatgactgcccaactggagttaaacaaggacaa 336
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaaaatctcactaacatgactgcccaactggagttaaacaaggacaa 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
