XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAG
GAACTTTTCCTTCTAGGCTCAGCCATTCCACCTTTGTTTCTTTATTCATT
ATGCATTTTTGATTACCTCCAGTAAGGTTGAGATTTACATAAAAGTGAAA
GAAATTATGAGAAACACCTGGTCACAAAGAAATATTATAAATGATGAAAT
AGTTACTGTCATTTAAGAATATATATATGCTGAGTTACTACAATTGTGTT
TGTACATTTTCTTTTTATTATTAAGTTTTGGGCAGTGTTAGAGATTTAAC
TGAGGGCCTTGTATATTTCTAGGCAAGCGTTGTACACTGAGTCATATTAC
AAGCTTTTTAAATTTTAAAATGTTTAAATCCCCAAACCAACAAATGACAT
AAATATCTTTATATTCTGGTGTGAAGCAGGAAAGAGATTGATATTAAAAT
ACAGCCTTTTAATATTCTAAGCATGTGCTAACATCTTTATAGCTATTGTT
CTAAACTAAAAGCAACTTCCATCATTGTTCATGACTTATGAATAACAAAA
CCCCTGCCTACAATAATTATATTAGATTCTTTAGAGTAATTTTACCCACC
TCCTTCTATCTACATTTTAATTTCTCTTTCCCCTTGTTAATTTATCTCCT
CTTGTATCTTTAAATCCCTGGGAATAAATTCCTCGCTGTCTTTTCTCTTC
CGATTTTTATGCTTTTTTTCCGCTTATTTTTCCCGTTCTCTACGCCACAG

AGTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTACATCTTCATCTGAAGGCTGATAGAAGACTG
GCTCCCACATGATTTGTAGGAGGGTCTCATTGTCCATTCCCACAGTGACA
TACTTCCTCCAACAAGGCCACATCTACTACAACAAGGCCACACCTCCTAA
CAGTTGCACTCCCTGGGACAAGCATTTTCAAACCACCACAATGTTTGGTC
TGGATTTCCCATATATATCTTCTATGTGTATGGGATATGTGTATGTGTGT
GTGNGNNNNNNNNNNNTNTTNNNNTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTNTTNTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTNNNTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTNNTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTNTTTTNTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTT
TNTTNNTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NNNNNTTTTTTTTCTTTTTTTTTTTNTTTTTTTTTTTTTCTTTTNTATTT
TTCTTATTTNTTTCTCTTATTTCACACTCTTCTCTTTTATCTCAATCTTT
TTATCCAACCACCACCTTTTTTTCTCATAATTTATATCTCTCTCTTTTCT
TTT

Query= MSMg01no343_k08.b1 MSMg01no343_k08.b1 CHROMAT_FILE:
MSMg01no343_k08.b1 PHD_FILE: MSMg01no343_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:33 2005
         (462 letters)



>mm_chr10_31498884_31499743
          Length = 860

 Score =  832 bits (430), Expect = 0.0
 Identities = 437/440 (99%), Gaps = 2/440 (0%)
 Strand = Plus / Plus

                                                                       
Query: 23  ttctaggctcagccattccacctttgtttctttattcattatgcatttttgattacctcc 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttctaggctcagccattccacctttgtttctttattcattatgcatttttgattacctcc 282

                                                                       
Query: 83  agtaaggttgagatttacataaaagtgaaagaaattatgagaaacacctggtcacaaaga 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agtaaggttgagatttacataaaagtgaaagaaattatgagaaacacctggtcacaaaga 342

                                                                       
Query: 143 aatattataaatgatgaaatagttactgtcatttaagaatatatatatgctgagttacta 202
           ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 343 aatattataaatgatgaaatagttactgtcatttaagaatatatat--gctgagttacta 400

                                                                       
Query: 203 caattgtgtttgtacattttctttttattattaagttttgggcagtgttagagatttaac 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caattgtgtttgtacattttctttttattattaagttttgggcagtgttagagatttaac 460

                                                                       
Query: 263 tgagggccttgtatatttctaggcaagcgttgtacactgagtcatattacaagcttttta 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tgagggccttgtatatttctaggcaagcgttgtacactgagtcatattacaagcttttta 520

                                                                       
Query: 323 aattttaaaatgtttaaatccccaaaccaacaaatgacataaatatctttatattctggt 382
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 521 aattttaaaatgtttaaatccccaaaccaacaaatgacataaatatctttgtattctggt 580

                                                                       
Query: 383 gtgaagcaggaaagagattgatattaaaatacagccttttaatattctaagcatgtgcta 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gtgaagcaggaaagagattgatattaaaatacagccttttaatattctaagcatgtgcta 640

                               
Query: 443 acatctttatagctattgtt 462
           ||||||||||||||||||||
Sbjct: 641 acatctttatagctattgtt 660


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 860
Length adjustment: 10
Effective length of query: 452
Effective length of database: 850
Effective search space:   384200
Effective search space used:   384200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)