Query= MSMg01no343_n13.b1 MSMg01no343_n13.b1 CHROMAT_FILE:
MSMg01no343_n13.b1 PHD_FILE: MSMg01no343_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:50 2005
(339 letters)
>mm_chr10_60892995_60893733
Length = 739
Score = 619 bits (320), Expect = 0.0
Identities = 335/340 (98%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 1 atcagcaggattccttccttgatcatacccccatgggtctcggggtaaagtctgtgccag 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 539 atcagcaggattccttccttgatcatatccccatgggtctcggggtaaagtctgtgccag 480
Query: 61 agcaccctgcttcctcctgaatggttgaccccagaggaggtagaagaaagttacagtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agcaccctgcttcctcctgaatggttgaccccagaggaggtagaagaaagttacagtgcc 420
Query: 121 tttaattcgccatgccctaaaaggaggaaaagaggagatgagggaggtggaggcagtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tttaattcgccatgccctaaaaggaggaaaagaggagatgagggaggtggaggcagtcac 360
Query: 181 agccataagctattagaacagacttctatctgcttgtcctagggagaggcggcaggaagt 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agccataagctattaggacagacttctatctgcttgtcctagggagaggcggcaggaagt 300
Query: 241 gaagattcccagatctactccctcaactgccatcttctcaagaatgcttgctttgcaggt 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gaagattcccagatctacaccctcaactgccatcttctcaagaatgcttgctttgcaggt 240
Query: 301 ctctgaggcggccgcttttaa-cattgcttaccacttctg 339
|||||||||||||||||| || ||||||||||||||||||
Sbjct: 239 ctctgaggcggccgcttt-aagcattgcttaccacttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_n13.g1 MSMg01no343_n13.g1 CHROMAT_FILE:
MSMg01no343_n13.g1 PHD_FILE: MSMg01no343_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:50 2005
(328 letters)
>mm_chr10_60713179_60713906
Length = 728
Score = 634 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Plus
Query: 1 actcttctttttaaagatttgtttgtttgtttgtttgtttgtttatgtatgtgagtacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcttctttttaaagatttgtttgtttgtttgtttgtttgtttatgtatgtgagtacac 260
Query: 61 tgtagctatcttcagacacatcagaagagggcatcggatcccattacagatggttgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagctatcttcagacacatcagaagagggcatcggatcccattacagatggttgagat 320
Query: 121 ccaccatgtggttgctgggaatcgaactcaggacctctgaaacagcagtcagtgctctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaccatgtggttgctgggaatcgaactcaggacctctgaaacagcagtcagtgctctaa 380
Query: 181 accactgagccatctctccaacccctaactcacttattctaacagggatctattgaaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accactgagccatctctccaacccctaactcacttattctaacagggatctattgaaagc 440
Query: 241 cttcagcatcccaggcaccaggagcccagatgtgaacataaaaccgtgcatattttttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcagcatcccaggcaccaggagcccagatgtgaacataaaaccgtgcatattttttat 500
Query: 301 aagctgacaggtctcctccatttgaacc 328
||||||||||||||||||||||||||||
Sbjct: 501 aagctgacaggtctcctccatttgaacc 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
