Query= MSMg01no343_n15.b1 MSMg01no343_n15.b1 CHROMAT_FILE:
MSMg01no343_n15.b1 PHD_FILE: MSMg01no343_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:50 2005
(502 letters)
>mm_chr10_123172293_123173194
Length = 902
Score = 893 bits (462), Expect = 0.0
Identities = 489/498 (98%)
Strand = Plus / Plus
Query: 5 gaattcaaagcatatagcgcagacagtataaaaataactgactacattcatttcagaatt 64
|||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcaaagcataaagtgcagacagtataaaaataactgactatattcatttcagaatt 264
Query: 65 aattagtatcttatgtgttgcttgcttgtttttgttttcttaaagtggtgagttgatttg 124
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 aattagtatcttatgtgttgcttgcttatttttgttttcttaaagtggtgagttgatttg 324
Query: 125 acacgcatatctaagaatctaagcagatatctggaatagatcggttggactgctataacg 184
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acacccatatctaagaatctaagcagatatctggaatagatcggttggactgctataacg 384
Query: 185 aatgcttcggtccttaacacctaggttcattgttacattagcttcttcatctttcagagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatgcttcggtccttaacacctaggttcattgttacattagcttcttcatctttcagagt 444
Query: 245 cacttaaacatagctttgttcttgacactgtgttactgttattattactactttttcatt 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 cacttaaacatagctttgttcttgacactgcgttactgttattattactactttttcatt 504
Query: 305 cgcatgggtccatcagtctaacacctgcttgtagcacaccagccaataggcatcacataa 364
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cgcatgggttcatcagtccaacacctgcttgtagcacaccagccaataggcatcacataa 564
Query: 365 aattgtgtgaagagcagctgtatgaaacatgacttctgtaaaggcaggtagaggccctga 424
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 565 aattgtgtgaagagcagctgtatgaaacatgacttctgcaaaggcaggtagaggccctga 624
Query: 425 agcagcaattatgacatgtggtgatggcataaaactggaaccatctctctgtctcgtaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agcagcaattatgacatgtggtgatggcataaaactggaaccatctctctgtctcgtaca 684
Query: 485 gcatgttgtgtctatagc 502
||||||||||||||||||
Sbjct: 685 gcatgttgtgtctatagc 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_n15.g1 MSMg01no343_n15.g1 CHROMAT_FILE:
MSMg01no343_n15.g1 PHD_FILE: MSMg01no343_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:50 2005
(429 letters)
>mm_chr10_123293609_123294437
Length = 829
Score = 667 bits (345), Expect = 0.0
Identities = 385/399 (96%), Gaps = 2/399 (0%)
Strand = Plus / Minus
Query: 1 agtctagaaatccatcatcactggcttggcacgcacctaagttctcctgtcaagttgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agtctagaaatccatcatcactggcttggcacgcacctaagttctcctgtcaagttgaag 338
Query: 61 ttctcatactacactcagtgtttataaatttctccaagttgcattacagtctatccaccc 120
||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttcccatactacactcactgtttataaatttctccaagttgcattacagtctatccacct 278
Query: 121 cccgcaaccttaactgatattgttttcttgtaataatggtaagagctaaattggtatggc 180
||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 277 cccacaaccttaactgatattgttttcctgtaataatggtaagagctaaattggtatggt 218
Query: 181 atttctacactgcttgggttgcttctcttattgttgagagcaaacacctaacaggaagga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gtttctacactgcttgggttgcttctcttattgttgagagcaaacacctaacaggaagga 158
Query: 241 atttgagagattatggactttctttggctcataggtgaggttacagtctgtcatggaggt 300
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 157 attggagggattatggactttctttggctcataggtgaggttacagtctgtcatggatgt 98
Query: 301 gtaagtcgtatcatggatacacatcctctacagtgaggagcaaatggagatgaatggtac 360
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 gtaagtc--atcgtggatacacatcctctacagtgaggagcaaatggagatgaatggtac 40
Query: 361 ttctcagcttgctttctccttcatattcagtccagggtt 399
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 39 ttctcagcttgctttctccttcatattccgtccagggtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
