Query= MSMg01no343_o12.b1 MSMg01no343_o12.b1 CHROMAT_FILE:
MSMg01no343_o12.b1 PHD_FILE: MSMg01no343_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:55 2005
(497 letters)
>mm_chr10_106782535_106783431
Length = 897
Score = 899 bits (465), Expect = 0.0
Identities = 483/489 (98%)
Strand = Plus / Plus
Query: 9 gaattcttagttttacatattcacttcttaaaataatctatactctttggaagccttata 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcttagttttacatattcacttcttaaaataatctatactctttggaagccttata 268
Query: 69 tcatttccgcactatgtagaccaggttggcctcgaactcacagagagaacttgctacctc 128
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttatttccgcactatgtagaccaggttggcctcgaactcacagagagaacttgctacctc 328
Query: 129 tgcctcccttcttgaaactgtcattaaaatgcagtgcaacagtgcccagatcaactggtc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgcctcccttcttgaaactgtcattaaaatgcagtgcaacagtgcccagatcaactggtc 388
Query: 189 tctttacataaaatcacgaggtctctctaacctgtttatgtcaacaggttatgatgacat 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tctttacataaaatcacgaggtctctctaacctgtttatgtcaacaggttatgatgacat 448
Query: 249 agggacaacagtgccacacatgtttttacagaatctcaagctaacttctgaggaatgtca 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agggacaacagtgccacacatgtttttacagaatctcaagctaacttctgaggaatgtca 508
Query: 309 atcaaaaacttggcaaagggagcaagtttcccatcgatcattgatttcttatttgagaaa 368
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atcaaaaacttggcaaagagagcaagtttcccatcgatcattgatttcttatttgagaaa 568
Query: 369 atatttatttcccattgtaatttctctaatggaattcagttcccttacttatgagaaagg 428
|||||||||| | |||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 569 atatttattttctattgaaatttctctaatggtattcagttcccttacttatgagaaagg 628
Query: 429 acttattcctggtacaagatagtgcttaaccaacaaccataactcaccaagagaacttga 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 acttattcctggtacaagatagtgcttaaccaacaaccataactcaccaagagaacttga 688
Query: 489 atgctggag 497
|||||||||
Sbjct: 689 atgctggag 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_o12.g1 MSMg01no343_o12.g1 CHROMAT_FILE:
MSMg01no343_o12.g1 PHD_FILE: MSMg01no343_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:55 2005
(494 letters)
>mm_chr10_106944372_106945266
Length = 895
Score = 667 bits (345), Expect = 0.0
Identities = 369/377 (97%), Gaps = 1/377 (0%)
Strand = Plus / Minus
Query: 1 actcttgcagaagtgaaataacttgcctgagtgctcacacacttttgtagcaacacttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 actcttgcagaagtgaaataacttgcctgagtgctcacacacttttgtagcaacacttga 318
Query: 61 atgttaaaataagtatctttttggtcagag-aaaaaaacatttctggatcaatgagaaac 119
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 317 atgttcaaataagtatctttttggtcagagaaaaaaaacatttctggatcaatgagaaac 258
Query: 120 aagggcggggaggctgggaaactggcatccattgttcatattaagaaacaggaacttaac 179
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 257 aagggtggggaggctgggaaactgacatccattgttcatattaagaaacaggaacttaac 198
Query: 180 cgggcagtggtggcgcatgcctttaatcccagcacttgggaggcagaggcaagcagattt 239
|||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 197 cgggcagtggtggcacatgcctttaatcccagcacttgggaggaagaggcaggcagattt 138
Query: 240 ctgagtttgaggccagcctggtctacagagtgagttccaggtcagccagggctacacaga 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ctgagttcgaggccagcctggtctacagagtgagttccaggtcagccagggctacacaga 78
Query: 300 gaaaccctgtctcgaaaaaccaaaataagcaaacaaacaaatgtagcatttaaaaacaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gaaaccctgtctcgaaaaaccaaaataagcaaacaaacaaatgtagcatttaaaaacaga 18
Query: 360 gaaaaaaagaaagaaaa 376
|||||||||||||||||
Sbjct: 17 gaaaaaaagaaagaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
