Query= MSMg01no345_a11.b1 MSMg01no345_a11.b1 CHROMAT_FILE:
MSMg01no345_a11.b1 PHD_FILE: MSMg01no345_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:24 2005
(574 letters)
>mm_chr10_71341368_71342341
Length = 974
Score = 752 bits (389), Expect = 0.0
Identities = 410/417 (98%)
Strand = Plus / Minus
Query: 158 tctaactcattctgtcaaatctttctctgattcatcactttgtctgcccctcattatatg 217
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 974 tctaactcattctgtcaaatctttctctgattcatcactttgtctgcccctcattagatg 915
Query: 218 tcattggaattaaaggtgtatactaaaggggtatctgcattccatccagaaggattaaag 277
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 914 tcattggaattaaaggtgtatactaaaggagtatctgcattccatccagaaggattaaag 855
Query: 278 gtatatgttgcagctggatcttacctttggatgtgatcccttgccatggcagccatgttg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gtatatgttgcagctggatcttacctttggatgtgatcccttgccatggcagccatgttg 795
Query: 338 ctcgattgaaatttctctaccatgaagaaaggtttttataaattccttatatgtttactc 397
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 794 cccgattgaaatttctctaccatgaagaaaggtttttataaattccttatatgtttacgc 735
Query: 398 atagaactgagaggaagcataaaaaatgcccagtatatagtgaagctctcaaaaatatta 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 atagaactgagaggaagcataaaaaatgcccagtatatagtgaagctctcaaaaatatta 675
Query: 458 gctgccatttatattactactactattgtccacaagaccttccttttagagcagccaagt 517
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 674 gctgccatttatattactactactattgtcctcaagaccttccttttagagcagccaagc 615
Query: 518 tcacttatcatcagctggtctctagggcagtgactctgattttaacacctacgtcta 574
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tcacttctcatcagctggtctctagggcagtgactctgattttaacacctacgtcta 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_a11.g1 MSMg01no345_a11.g1 CHROMAT_FILE:
MSMg01no345_a11.g1 PHD_FILE: MSMg01no345_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:24 2005
(518 letters)
>mm_chr10_71206104_71207020
Length = 917
Score = 940 bits (486), Expect = 0.0
Identities = 510/518 (98%), Gaps = 1/518 (0%)
Strand = Plus / Plus
Query: 1 ttagaataatataggatgactgaatgagtatgttactgaattattgtcaatgaacataga 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagaataatataagatgactgaatgagtatgttactgaattattgtcaatgaacataga 260
Query: 61 acacattgaatacagctttcaatacagctttatttttttgtggtgtggatacataaggag 120
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 acacattgagtacagctttcaatacagctttatttttt-gtggtgtggatacataaggag 319
Query: 121 aagagaattgttgcccttaggatggaaacagacctgtctactgattatttgagaatggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagagaattgttgcccttaggatggaaacagacctgtctactgattatttgagaatggct 379
Query: 181 cttgtattgagaaactatagttttaaatcattcctactataattaatcccagggttggat 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 cttgtattgagaaactatagttttaaatcattcctactataattgatcccagggttggat 439
Query: 241 tcaaaggctcataataaatgaaatgagtttatggtagtagactccatttctgccattttg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaaaggctcataataaatgaaatgagtttatggtagtagactccatttctgccatttta 499
Query: 301 atgttttgcttagtaagtaattgtctattcgagacaattgttctaaggtgggtgcagtgc 360
||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct: 500 atgttttgcttagtaagtaattgtctatttgagacaattattctaaggtgggtacagtgc 559
Query: 361 tatactcctacaatcctgatacttgggaggctgaggcaggcagagaatgagatcaagatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatactcctacaatcctgatacttgggaggctgaggcaggcagagaatgagatcaagatc 619
Query: 421 agcctgcatagctatacagtaagatctaacacaaacaaaacagaaactgatttatagtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agcctgcatagctatacagtaagatctaacacaaacaaaacagaaactgatttatagtct 679
Query: 481 ttattccattgataaatttgcaattatcattgatgtgt 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttattccattgataaatttgcaattatcattgatgtgt 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 917
Length adjustment: 10
Effective length of query: 508
Effective length of database: 907
Effective search space: 460756
Effective search space used: 460756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
