Query= MSMg01no346_k21.b1 MSMg01no346_k21.b1 CHROMAT_FILE:
MSMg01no346_k21.b1 PHD_FILE: MSMg01no346_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:26 2005
(555 letters)
>mm_chr10_129796505_129797459
Length = 955
Score = 671 bits (347), Expect = 0.0
Identities = 355/361 (98%), Gaps = 6/361 (1%)
Strand = Plus / Minus
Query: 201 agcctgtggaacaggatttagctctagacaactatttcagcaccatgcgtgctgccatgc 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 agcctgtggaacaggatttagctctagacaactatttcagcaccatgcgtgctgccatgc 896
Query: 261 tctccaccaagaggacaatggactaaacctctgaaactgtaagcaagctcccaattaaca 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tctccaccaagaggacaatggactaaacctctgaaactgtaagcaagctcccaattaaca 836
Query: 321 ------ttttttttttttaaataagagttgctttggtcatggtgttatggtgttttttca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tttgttttttttttttttaaataagagttgctttggtcatggtgttatggtgttttttca 776
Query: 375 cagctacagaacagtgactagagcaatacttaatagtattgtagctttgaaaagagctgt 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 cagctacagaacagtgactagagcaatacttaatagtattgtagctttgaaaagagctgt 716
Query: 435 taatatttgaacctaatttctgtgtctggaggcatggggaagtatattccagttctgttt 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 taatatttgaacctaatttctgtgtctggaggcatggggaagtatattccagttctgttt 656
Query: 495 ataaaaaaaaattagcatagagctttgaaccgtttctacagcagaaaacaaatctaaatg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ataaaaaaaaattagcatagagctttgaaccgtttctacagcagaaaacaaatctaaatg 596
Query: 555 a 555
|
Sbjct: 595 a 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_k21.g1 MSMg01no346_k21.g1 CHROMAT_FILE:
MSMg01no346_k21.g1 PHD_FILE: MSMg01no346_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:26 2005
(494 letters)
>mm_chr10_129631531_129632425
Length = 895
Score = 903 bits (467), Expect = 0.0
Identities = 488/495 (98%), Gaps = 2/495 (0%)
Strand = Plus / Plus
Query: 1 ttattgtttatccgggtcagttaagtagatgttaccatgtgttctggctggctttatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttattgtttatccgggtcagttaagtagatgttaccatgtgttctggctggctttatgta 261
Query: 61 taacttgatacaggttgaagttatcatcgagaaaggaacatcagttgggaaaatgcctcc 120
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 262 taacttgatacaggttggagttatcatcgagaaaggagcatcagttgggaaaatgcctcc 321
Query: 121 atgagattcagctgtggagcattttctcagttggtgatcaaggctggagggcccattgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgagattcagctgtggagcattttctcagttggtgatcaaggctggagggcccattgtg 381
Query: 181 ggtggtgccatccctagtctggtagtcttgggtcctataagagaccaagctggcttctgc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 382 ggtggtgccatccctagtctggtagtcttgggtcctataagagaccaagctgacttctgc 441
Query: 241 atcagctcctgcttcctgacctgcttgagttccagttctgacttcctttggagatgaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atcagctcctgcttcctgacctgcttgagttccagttctgacttcctttggagatgaaca 501
Query: 301 gcaatgtggaaagtgtaagctgaataaacccttttctccaacttgtgtcttggtcatgat 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gcaatgtg-aaagtgtaagctgaataaacccttttctccaacttgtgtcttggtcatgat 560
Query: 361 atttgtgcaggaataaaaaccctgactaagacactatgacagcaagaaagcaaacatatt 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 atttgtgcaggaataaaaaccctgactaagacactatgactgcaagaaagcaaacatatt 620
Query: 421 atttttt-cctgtaaagcttacagatgagtaaatactctgactacagggcaacataataa 479
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttttttcctgtaacgcttacagatgagtaaatactctgactacagggcaacataataa 680
Query: 480 tttccctattttatt 494
|||||||||||||||
Sbjct: 681 tttccctattttatt 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
