Query= MSMg01no347_k18.b1 MSMg01no347_k18.b1 CHROMAT_FILE:
MSMg01no347_k18.b1 PHD_FILE: MSMg01no347_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:43 2005
(439 letters)
>mm_chr10_25424851_25425692
Length = 842
Score = 737 bits (381), Expect = 0.0
Identities = 423/439 (96%), Gaps = 5/439 (1%)
Strand = Plus / Minus
Query: 5 gaattctatgctttgtctagtcaatgttgtgaaaatcagaccagaggctgggagcacttt 64
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 642 gaattctatgctttgtctagtcactgttgtgaaaatcagaccagaggctcggagcacttt 583
Query: 65 gcagtctggcttctaccactactaacagatccatatacctgaagaaaagaagagcttctg 124
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 582 gcagtctgtcttctaccactactaacagatccatatacctgaag-aaagaagagcttctg 524
Query: 125 ctaacaagcctcctgtggctcagaccgctaagtcagtgagtcccaaaaccagttcaagat 184
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 523 ctaacaagcctcctgtagctcagatcgctaagtcagtgagtcccaaaaccagttcaagat 464
Query: 185 ctccaactccccatcacccatctgccaaacagataagtctgttgagaagatgttttgggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctccaactccccatcacccatctgccaaacagataagtctgttgagaagatgttttgggg 404
Query: 245 tctcagggagggagaccatgcacctgtagagacttagctattgtacgttttgaaaaatgc 304
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |
Sbjct: 403 tctcagggagggagaccatgcacctgtagagacttagctactgtacattttgaataatac 344
Query: 305 ttcaaatatacactttgaaaaccagaaaaccagagcttttgaagtacacagcagaaggca 364
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 343 ttcaaatatacactttgaaaaccagaaaaccagagcatttgaagtacacagcagaaggca 284
Query: 365 tacatctgaaaagaactttaatttcaacttttgtttttt----aacaaaataaagtgctg 420
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 283 tacatctgaaaagaactttaatctcaacttttgttttttttttaacaaaataaagtgctg 224
Query: 421 ctgtgacgttaacgctgag 439
|||||||||||||||||||
Sbjct: 223 ctgtgacgttaacgctgag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 842
Length adjustment: 9
Effective length of query: 430
Effective length of database: 833
Effective search space: 358190
Effective search space used: 358190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_k18.g1 MSMg01no347_k18.g1 CHROMAT_FILE:
MSMg01no347_k18.g1 PHD_FILE: MSMg01no347_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:43 2005
(387 letters)
>mm_chr10_25286332_25287118
Length = 787
Score = 710 bits (367), Expect = 0.0
Identities = 382/387 (98%)
Strand = Plus / Plus
Query: 1 ctaaatgattctgtttgacaagaagagggggacattgtaattggcagagaggatcaattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaatgattctgtttgacaagaagagggggacattgtaattggcagagaggatcaattg 260
Query: 61 gctgtgtctgcagtagattttgctgacagaagttgatagattccattctgacttaactgg 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccgtgtctgcagtagattttgctgacagaagttgatagattccattctgacttaactgg 320
Query: 121 gctgtggagctaagtaggtagtgagtgttggtcattaaggggtgacctcattcattcgta 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 321 gctgtggagctaagtaggtagtgaatgttggtcattaaggggtgacctcattcattagtg 380
Query: 181 tgttcctgttctcatgtcctgcctttctgttttctctccccctgcttattctcttgatcc 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttcctgtcctcatgtcctgcctttctgttttctctccccctgcttattctcttgatcc 440
Query: 241 attttgccttccctcccttagtttcggttagcacaaagtctcagtagcctgctgctctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attttgccttccctcccttagtttcggttagcacaaagtctcagtagcctgctgctctct 500
Query: 301 tcccagttccctaaacctcattgtttgtacagctctgccctccaatcagggcctcctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcccagttccctaaacctcattgtttgtacagctctgccctccaatcagggcctcctctg 560
Query: 361 acaaattctgtggttcttatttaatgg 387
|||||||||||||||||||||||||||
Sbjct: 561 acaaattctgtggttcttatttaatgg 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
