Query= MSMg01no347_m21.b1 MSMg01no347_m21.b1 CHROMAT_FILE:
MSMg01no347_m21.b1 PHD_FILE: MSMg01no347_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:54 2005
(385 letters)
>mm_chr10_116204961_116205745
Length = 785
Score = 729 bits (377), Expect = 0.0
Identities = 383/385 (99%)
Strand = Plus / Minus
Query: 1 tatagctcagcttcacgtggagtgggcagtcactaggggctcactcccatcttcccatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tatagctcagcttcacgtggagtgggcagtcactaggggctcactcccatcttcccatct 526
Query: 61 ctccttaggggctacatggcaacttgctctcgtctttttacctgaccagtttaccctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctccttaggggctacatggcaacttgctctcgtctttttacctgaccagtttaccctttg 466
Query: 121 ctcagacccagtttcttttcctaacacttgcttgtatgcatcatggctaccctaaaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctcagacccagtttcttttcctaacacttgcttgtatgcatcatggctaccctaaaatgt 406
Query: 181 ttcctggaccccaagatttcgctcatctcctgatcggttctccaaggccaagtgactttc 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttcctggaccccaagatttcactcatctcctgatcggttctccaaggccaagtgactttc 346
Query: 241 agggttcaaattctatgaaagaaaatctgaccggtggcccggctgctcatttgggcttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agggttcaaattctatgaaagaaaatctgaccggtggcccggctgctcatttgggcttta 286
Query: 301 atcagctctggccacctaaaagggtcacgtgatctgtaagaataccccatgcaagcaggg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 285 atcagctctggccacctaaaagggtcacgtgatctgtaagaatgccccatgcaagcaggg 226
Query: 361 ataagtagtagacagattctctaag 385
|||||||||||||||||||||||||
Sbjct: 225 ataagtagtagacagattctctaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_m21.g1 MSMg01no347_m21.g1 CHROMAT_FILE:
MSMg01no347_m21.g1 PHD_FILE: MSMg01no347_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:54 2005
(472 letters)
>mm_chr10_116055306_116056176
Length = 871
Score = 866 bits (448), Expect = 0.0
Identities = 466/472 (98%), Gaps = 1/472 (0%)
Strand = Plus / Plus
Query: 1 ctgattgacagtccaggacagaaagagcatctcccctggggtggggctctcaaggacaag 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgactgacagtccaggacagaaagagcatctcccctggggtggggctctcaaggacaag 260
Query: 61 aacaaatgggaagcaacagatagatagaaaaccatcaaaggaggctctacaacatccagc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaaatgggaagcagcagatagatagaaaaccatcaaaggaggctctacaacatccagc 320
Query: 121 agaaaccactgggattcccggctaaaaaacagtccagctggatcttctagtcgggagcgc 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 agaaaccactgggattcccggctaaaaa-cagtccagctggatcttctagtcgggagcgc 379
Query: 181 caaacacagagctttctctctacagaggagcttctggcctgcgttcacaccacaggtatc 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 380 caaacacagagctttctctctacagaggagcttctggcctgctttcacaccacaggtatc 439
Query: 241 tatgtgatgggataaacaataatgacctctattggaaatggtttacagtctagctattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatgtgatgggataaacaataatgacctctattggaaatggtttacagtctagctattct 499
Query: 301 caagggcacaatgtcttaaacacattagctgcttgttgttctccttcctccctgttaagg 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 caagggcacaatgtcttaaacacattagctgcttgttgttctccttcttccctgttaagg 559
Query: 361 agcccagctgcagcaaggggcaaacatacccatcgcttattctcaaagtcagttctaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agcccagctgcagcaaggggcaaacatacccatcgcttattctcaaagtcagttctaaat 619
Query: 421 aagtgcaaacagcacatagcagtacaaattctctgacatctacaaacagaat 472
|||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 aagtgcaaacagcacatagcagtaaaaattctctgacatctacaaacagaat 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 871
Length adjustment: 10
Effective length of query: 462
Effective length of database: 861
Effective search space: 397782
Effective search space used: 397782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
