Query= MSMg01no347_p05.b1 MSMg01no347_p05.b1 CHROMAT_FILE:
MSMg01no347_p05.b1 PHD_FILE: MSMg01no347_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:05 2005
(583 letters)
>mm_chr10_43919552_43920534
Length = 983
Score = 1081 bits (559), Expect = 0.0
Identities = 574/579 (99%)
Strand = Plus / Plus
Query: 5 gaattctagcagatctccagagaagatctgataccaatattcctaaaattattccataaa 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagcagaccttcagagaagatctgataccaatattcctaaaattattccataaa 264
Query: 65 gtagaaacagaaggaacactacctatctcattttatgaagccacaattactctgatacct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtagaaacagaaggaacactacctatctcattttatgaagccacaattactctgatacct 324
Query: 125 aaaccacaaaaggacccaattaaaaaatagaactttaatctcgcttatgaatatcgatgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaccacaaaaggacccaattaaaaaatagaactttaatctcgcttatgaatatcgatgc 384
Query: 185 aaaaatactcaataaaattcttgcaaaccgaatccaagaacacatccaaaccattattca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaatactcaataaaattcttgcaaaccgaatccaagaacacatccaaaccattattca 444
Query: 245 acataatcaaataggcttcatcccagggatgcaaggttggattaatatatgaaaatctct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acataatcaaataggcttcatcccagggatgcaaggttggattaatatatgaaaatctct 504
Query: 305 taatgtaatcaactatataaacaaactcaaagaaaaaaatcatatgatcatctccttacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taatgtaatcaactatataaacaaactcaaagaaaaaaatcatatgatcatctccttacc 564
Query: 365 agcagcaccagcatttgacgagatacaacacccctgcatgttaaagtattggagagatca 424
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agcagtaaaagcatttgacgagatacaacacccctgcatgttaaagtattggagagatca 624
Query: 425 ggaattcaaggcccatacctaaacctaataaaagcaatgttcttttttcttttcgttatt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggaattcaaggcccatacctaaacctaataaaagcaatgttcttttttcttttcgttatt 684
Query: 485 gatttcttgaggacttcttaggtgtcttttgatcatagttattcatccacaacctaataa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gatttcttgaggacttcttaggtgtcttttgatcatagttattcatccacaacctaataa 744
Query: 545 tcacttccctattcacctgtttcttgacttattttgttc 583
|||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcacttccctattcacctgtttcttgacttattttgttc 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_p05.g1 MSMg01no347_p05.g1 CHROMAT_FILE:
MSMg01no347_p05.g1 PHD_FILE: MSMg01no347_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:05 2005
(291 letters)
>mm_chr10_44084609_44085302
Length = 694
Score = 518 bits (268), Expect = e-151
Identities = 287/294 (97%), Gaps = 3/294 (1%)
Strand = Plus / Minus
Query: 1 ctcccctgtcatcaaagccaagaacttactttttttcattctcagagtgagccacctact 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctcccctgtcaccaaagccaagaacttactttttttcattctcagagtgagccacctact 435
Query: 61 aagacctgtagcccattcgttctccattatccctcatcccacatctctgtagaaacttgt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aagacccgtagcccattcgttctccattatccctcatcccacatctctgtagaaacttgt 375
Query: 121 agtctgaatatgagggaatcccaatcttgctctataaatatttcactcccaactcctagg 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtctgaagatgagggaatcccaatcttgctctataaatatttcactcccaactcctagg 315
Query: 181 aatgaaggcaaacatatttacctagc--tttagtaggccat-agacttaagtgctcaaat 237
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 314 aatgaaggcaaacatatttacctagctttttagtaggccataagacttaagtgctcaaat 255
Query: 238 aaaaactaggtattgtatccagcactaattcctggctttattctgtctctggtc 291
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 254 aaaaactaggtattgtagccagcactaattcctggctttattctgtctctggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 694
Length adjustment: 9
Effective length of query: 282
Effective length of database: 685
Effective search space: 193170
Effective search space used: 193170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
